RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 IQCDQ96DY2 449 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 ERGIC2Q96RQ1 377 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 KCTD10Q9H3F6 313 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 TRAF5O00463 557 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 GNA14O95837 355 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 TMEM132BQ14DG7 1078 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 VWA3BQ502W6 1294 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 SFR1Q86XK3 245 aa27.9■■■□□ 2.06
SHOX2-201ENST00000389589 LOC285556D6RIA3 1793 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 MYH11P35749 1972 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 EDRF1Q3B7T1 1238 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 DPY19L2Q6NUT2 758 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 C1orf186Q6ZWK4 172 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 EPM2AIP1Q7L775 607 aaPredicted RBP27.89■■■□□ 2.06
SHOX2-201ENST00000389589 TMTC1Q8IUR5 882 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 LXNQ9BS40 222 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 CAPN11Q9UMQ6 739 aa27.89■■■□□ 2.06
SHOX2-201ENST00000389589 ADM5C9JUS6 153 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 MYCLP12524 364 aaPredicted RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 KRT9P35527 623 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 IREB2P48200 963 aaKnown RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 REXO1L1PQ8IX06 675 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 OLFML3Q9NRN5 406 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 LUC7L2Q9Y383 392 aaKnown RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 SPDYE16A6NNV3 312 aaPredicted RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 P4HBP07237 508 aaKnown RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 CCND2P30279 289 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 ITGB3BPQ13352 177 aaPredicted RBP27.88■■■□□ 2.05
SHOX2-201ENST00000389589 NELFCDQ8IXH7 590 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 KIF18AQ8NI77 898 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 ACAD9Q9H845 621 aa27.88■■■□□ 2.05
SHOX2-201ENST00000389589 DDX39AO00148 427 aaKnown RBP27.87■■■□□ 2.05
SHOX2-201ENST00000389589 ZC3H3Q8IXZ2 948 aaKnown RBP27.87■■■□□ 2.05
SHOX2-201ENST00000389589 NDST4Q9H3R1 872 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 TTC26A0AVF1 554 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 FAM13AO94988 1023 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 SYCP1Q15431 976 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 BMT2Q1RMZ1 405 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 FIGNQ5HY92 759 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 CYP26C1Q6V0L0 522 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 TOGARAM2Q6ZUX3 1019 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 USP50Q70EL3 339 aaPredicted RBP27.87■■■□□ 2.05
SHOX2-201ENST00000389589 ZNF592Q92610 1267 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 L3MBTL3Q96JM7 780 aaPredicted RBP27.87■■■□□ 2.05
SHOX2-201ENST00000389589 ZSWIM4Q9H7M6 989 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 PKD2L1Q9P0L9 805 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 SEL1LQ9UBV2 794 aa27.87■■■□□ 2.05
SHOX2-201ENST00000389589 KIAA1217Q5T5P2 1943 aa27.86■■■□□ 2.05
SHOX2-201ENST00000389589 GTF2F1P35269 517 aaKnown RBP eCLIP27.86■■■□□ 2.05
SHOX2-201ENST00000389589 VSIG10LQ86VR7 867 aa27.86■■■□□ 2.05
SHOX2-201ENST00000389589 OR8K1Q8NGG5 319 aa27.86■■■□□ 2.05
SHOX2-201ENST00000389589 NSUN6Q8TEA1 469 aaKnown RBP27.86■■■□□ 2.05
SHOX2-201ENST00000389589 MRPL44Q9H9J2 332 aaKnown RBP27.86■■■□□ 2.05
SHOX2-201ENST00000389589 WRAP73Q9P2S5 460 aaPredicted RBP27.86■■■□□ 2.05
SHOX2-201ENST00000389589 ODF2LQ9ULJ1 636 aa27.86■■■□□ 2.05
SHOX2-201ENST00000389589 SOWAHDA6NJG2 315 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 RSPH10B2B2RC85 870 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 RSPH10BP0C881 870 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 MARSP56192 900 aaKnown RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 KNOP1Q1ED39 458 aaKnown RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 TSR1Q2NL82 804 aaKnown RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 BANK1Q8NDB2 785 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 ZC3H15Q8WU90 426 aaKnown RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 TRAF3IP3Q9Y228 551 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 RNF225M0QZC1 329 aaPredicted RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 MAFGO15525 162 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 CCDC175P0C221 793 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 TRIM21P19474 475 aaKnown RBP27.85■■■□□ 2.05
SHOX2-201ENST00000389589 NF2P35240 595 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 CCDC40Q4G0X9 1142 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 GPRASP2Q96D09 838 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 DNAJC7Q99615 494 aa27.85■■■□□ 2.05
SHOX2-201ENST00000389589 ARHGEF35A5YM69 484 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 RIOK3O14730 519 aaKnown RBP27.84■■■□□ 2.05
SHOX2-201ENST00000389589 NR3C2P08235 984 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 CASP5P51878 434 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 NLRX1Q86UT6 975 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 TTYH3Q9C0H2 523 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 PARVGQ9HBI0 331 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 TCEAL9Q9UHQ7 104 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 A0A0G2JMZ2 1700 aa27.84■■■□□ 2.05
SHOX2-201ENST00000389589 A0A1W2PQJ5 194 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 PDXKO00764 312 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 LYPLA2O95372 231 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 GUCY2CP25092 1073 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 JAK3P52333 1124 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 RAD9BQ6WBX8 426 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 PCMTD1Q96MG8 357 aaPredicted RBP27.83■■■□□ 2.05
SHOX2-201ENST00000389589 CYP39A1Q9NYL5 469 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 SAMM50Q9Y512 469 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 TESPA1A2RU30 521 aaPredicted RBP27.83■■■□□ 2.05
SHOX2-201ENST00000389589 ZBTB39O15060 712 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 CETN3O15182 167 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 EIF3DO15371 548 aaKnown RBP eCLIP27.83■■■□□ 2.05
SHOX2-201ENST00000389589 CALUO43852 315 aaPredicted RBP27.83■■■□□ 2.05
SHOX2-201ENST00000389589 SFNP31947 248 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 ETF1P62495 437 aaKnown RBP27.83■■■□□ 2.05
SHOX2-201ENST00000389589 KRT76Q01546 638 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 PPATQ06203 517 aa27.83■■■□□ 2.05
SHOX2-201ENST00000389589 DLK2Q6UY11 383 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms