RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 BAG4O95429 457 aaKnown RBP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 ITGB8P26012 769 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 U2AF2P26368 475 aaKnown RBP eCLIP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 ZNF174Q15697 407 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 CALCRLQ16602 461 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 CHRDL2Q6WN34 429 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 TRMT1LQ7Z2T5 733 aaKnown RBP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 MIER3Q7Z3K6 550 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 CCDC60Q8IWA6 550 aaPredicted RBP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 SMAP1Q8IYB5 467 aaPredicted RBP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 INTS4Q96HW7 963 aaKnown RBP21.87■■□□□ 1.09
GTF3A-201ENST00000381140 FAM20AQ96MK3 541 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 HIPK3Q9H422 1215 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 KCNMB3Q9NPA1 279 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 DISC1Q9NRI5 854 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 SETD4Q9NVD3 440 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 TRPC6Q9Y210 931 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 PCDHA10Q9Y5I2 948 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 SCN5AQ14524 2016 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 CYP2C18P33260 490 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 IGBP1P78318 339 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 HIC1Q14526 733 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 NBR1Q14596 966 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 TTC38Q5R3I4 469 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 PDXDC2PQ6P474 469 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 CKAP2LQ8IYA6 745 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 SPRYD3Q8NCJ5 442 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 HAS1Q92839 578 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 GABBR1Q9UBS5 961 aa21.87■■□□□ 1.09
GTF3A-201ENST00000381140 EVPLQ92817 2033 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 TIMP1P01033 207 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 PDCP20941 246 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 JAK3P52333 1124 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 PPFIA1Q13136 1202 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 PLPPR4Q7Z2D5 763 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 ATP6V0A1Q93050 837 aa21.86■■□□□ 1.09
GTF3A-201ENST00000381140 NOC4LQ9BVI4 516 aaKnown RBP21.86■■□□□ 1.09
GTF3A-201ENST00000381140 TANC1Q9C0D5 1861 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 IGKV6D-21A0A0A0MT36 114 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 TBX3O15119 743 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 SFNP31947 248 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 CCL23P55773 120 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 PLCB4Q15147 1175 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 SLFN12Q8IYM2 578 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 LMBR1Q8WVP7 490 aa21.85■■□□□ 1.09
GTF3A-201ENST00000381140 TREHO43280 583 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 TXKP42681 527 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 GRIK4Q16099 956 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 NCAPH2Q6IBW4 605 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 FERMT3Q86UX7 667 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 AFAP1L1Q8TED9 768 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 CTAGE1Q96RT6 745 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 UBE2OQ9C0C9 1292 aaKnown RBP21.84■■□□□ 1.09
GTF3A-201ENST00000381140 TMEM60Q9H2L4 133 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 VAV3Q9UKW4 847 aa21.84■■□□□ 1.09
GTF3A-201ENST00000381140 POTEB3A0JP26 581 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 EML1O00423 815 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 GNAT1P11488 350 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 INSRRP14616 1297 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 SYT1P21579 422 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 TRAPPC10P48553 1259 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 UGCGQ16739 394 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 POTEBQ6S5H4 581 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 RETREG2Q8NC44 543 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 TRAPPC12Q8WVT3 735 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 COLQQ9Y215 455 aaPredicted RBP21.83■■□□□ 1.08
GTF3A-201ENST00000381140 NRCAMQ92823 1304 aa21.83■■□□□ 1.08
GTF3A-201ENST00000381140 SLC26A2P50443 739 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 TOB1P50616 345 aaPredicted RBP21.82■■□□□ 1.08
GTF3A-201ENST00000381140 FPGSQ05932 587 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 PPP2R5CQ13362 524 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 BFSP2Q13515 415 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 CCDC155Q8N6L0 562 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 DHX38Q92620 1227 aaKnown RBP21.82■■□□□ 1.08
GTF3A-201ENST00000381140 SCLYQ96I15 445 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 GDF15Q99988 308 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 TTC12Q9H892 705 aaPredicted RBP21.82■■□□□ 1.08
GTF3A-201ENST00000381140 PCDHA12Q9UN75 941 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 PCDHB6Q9Y5E3 794 aa21.82■■□□□ 1.08
GTF3A-201ENST00000381140 MAFBQ9Y5Q3 323 aaPredicted RBP21.82■■□□□ 1.08
GTF3A-201ENST00000381140 PTK7Q13308 1070 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 MFSD5Q6N075 450 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 B3GNT9Q6UX72 402 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 TMEM199Q8N511 208 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 BANK1Q8NDB2 785 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 RDM1Q8NG50 284 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 ATP8B4Q8TF62 1192 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 TNPO1Q92973 898 aaKnown RBP21.81■■□□□ 1.08
GTF3A-201ENST00000381140 WNT8BQ93098 351 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 ZBTB10Q96DT7 871 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 WNT8AQ9H1J5 351 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 IGSF9BQ9UPX0 1349 aa21.81■■□□□ 1.08
GTF3A-201ENST00000381140 LOXHD1Q8IVV2 1947 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 OR52Z1P0C646 297 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 CSF2RAP15509 400 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 ATP4AP20648 1035 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 HOXC8P31273 242 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 SERINC5Q86VE9 423 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 MTMR9Q96QG7 549 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms