RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 POLR3CQ9BUI4 534 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-201ENST00000379989 KRT23Q9C075 422 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 GREM2Q9H772 168 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ECT2Q9H8V3 914 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ETNK2Q9NVF9 386 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 RMND1Q9NWS8 449 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 UBAP1Q9NZ09 502 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 SCOCQ9UIL1 159 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 DENND2AQ9ULE3 1009 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 HPSEQ9Y251 543 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 SALL1Q9NSC2 1324 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 MYH10P35580 1976 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 A0A0J9YVX5 310 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 RAD23BP54727 409 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 HERVK_113P62684 666 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 LACTBP83111 547 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-201ENST00000379989 CCDC122Q5T0U0 273 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 SLC9C2Q5TAH2 1124 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 PIGWQ7Z7B1 504 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF554Q86TJ5 538 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-201ENST00000379989 WASF1Q92558 559 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 TRIM11Q96F44 468 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 HAPLN3Q96S86 360 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 MPHOSPH6Q99547 160 aaKnown RBP8.15□□□□□ -1.11
CDKL5-201ENST00000379989 CHP1Q99653 195 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 FAM192AQ9GZU8 254 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 JADE2Q9NQC1 790 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 ARHGEF3Q9NR81 526 aa8.15□□□□□ -1.11
CDKL5-201ENST00000379989 TRPC5Q9UL62 973 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-201ENST00000379989 EPN1Q9Y6I3 576 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-201ENST00000379989 MYH7BA7E2Y1 1941 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF213O14771 459 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 PRC1O43663 620 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CDC25AP30304 524 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 LIFRP42702 1097 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 GUCY2FP51841 1108 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 TIMM10P62072 90 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 PLS1Q14651 629 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF362Q5T0B9 420 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CACNA2D4Q7Z3S7 1137 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 RALYLQ86SE5 291 aaKnown RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 WDR66Q8TBY9 1149 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 NR1H4Q96RI1 486 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 SRPK1Q96SB4 655 aaKnown RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ADD3Q9UEY8 706 aaKnown RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 IQSEC3Q9UPP2 1182 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 TMED5Q9Y3A6 229 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ESYT3A0FGR9 886 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ANO9A1A5B4 782 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ZSCAN5CA6NGD5 496 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 FOXN1O15353 648 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CYP1A1P04798 512 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 POLR3DP05423 398 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 IDEP14735 1019 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CD97P48960 835 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 SUSD4Q5VX71 490 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 TPTE2Q6XPS3 522 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CCDC65Q8IXS2 484 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 FBF1Q8TES7 1133 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 PPP2R3CQ969Q6 453 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 PPP1R14BQ96C90 147 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 KLHL29Q96CT2 875 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 XPO6Q96QU8 1125 aaKnown RBP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 SMARCAL1Q9NZC9 954 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 NIP7Q9Y221 180 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDKL5-201ENST00000379989 CHD4Q14839 1912 aa8.14□□□□□ -1.11
CDKL5-201ENST00000379989 E7ENQ6 273 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 E7EWF7 191 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GCOM1H8Y6P7 765 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 P4HA2O15460 535 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GLI1P08151 1106 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 MYZAPP0CAP1 466 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CALB2P22676 271 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CACNA2D1P54289 1103 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 MAP7D1Q3KQU3 841 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CAVIN4Q5BKX8 364 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ARHGAP18Q8N392 663 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SPATA5Q8NB90 893 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SLC17A8Q8NDX2 589 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SNRNP27Q8WVK2 155 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 DNAJC9Q8WXX5 260 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 HIC2Q96JB3 615 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SPATA16Q9BXB7 569 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 RNPEPL1Q9HAU8 725 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GDF3Q9NR23 364 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF180Q9UJW8 692 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CROTQ9UKG9 612 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 HTR3EA5X5Y0 456 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ASAP2O43150 1006 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms