RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TMEM132BQ14DG7 1078 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 MAN2A1Q16706 1144 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
SNX2-201ENST00000379516 TMTC1Q8IUR5 882 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 PDCD2LQ9BRP1 358 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 ZNF214Q9UL59 606 aaPredicted RBP16.66■□□□□ 0.26
SNX2-201ENST00000379516 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
SNX2-201ENST00000379516 TUBB4AP04350 444 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 FECHP22830 423 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX2-201ENST00000379516 ITGB3BPQ13352 177 aaPredicted RBP16.66■□□□□ 0.26
SNX2-201ENST00000379516 C1orf186Q6ZWK4 172 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 OR8K1Q8NGG5 319 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 ERGIC2Q96RQ1 377 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 NUP58Q9BVL2 599 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 SNCAIPQ9Y6H5 919 aa16.66■□□□□ 0.26
SNX2-201ENST00000379516 SFI1A8K8P3 1242 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 DYNC1I1O14576 645 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 FAM13AO94988 1023 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 CCDC175P0C221 793 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 YBX3P16989 372 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■□□□□ 10.6
SNX2-201ENST00000379516 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 CYP26C1Q6V0L0 522 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 BCAS3Q9H6U6 928 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 MRPL44Q9H9J2 332 aaKnown RBP16.65■□□□□ 0.26
SNX2-201ENST00000379516 HOXC10Q9NYD6 342 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 SBF1O95248 1867 aa16.65■□□□□ 0.26
SNX2-201ENST00000379516 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 MYBP10242 640 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 ERVK-24P63145 666 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 PLS1Q14651 629 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 TBC1D22BQ9NU19 505 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 PRPF6O94906 941 aaKnown RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 GCNT3O95395 438 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 ADAM9Q13443 819 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.25
SNX2-201ENST00000379516 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 TTYH3Q9C0H2 523 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 CSADQ9Y600 493 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 ADGRG1Q9Y653 693 aa16.64■□□□□ 0.25
SNX2-201ENST00000379516 SPDYE16A6NNV3 312 aaPredicted RBP16.63■□□□□ 0.25
SNX2-201ENST00000379516 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 GNA14O95837 355 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 P4HBP07237 508 aaKnown RBP16.63■□□□□ 0.25
SNX2-201ENST00000379516 GAP43P17677 238 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 MYCT1Q8N699 235 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 DNAJC7Q99615 494 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 AGPAT5Q9NUQ2 364 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 CETN3O15182 167 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 CCND2P30279 289 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 CHP1Q99653 195 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
SNX2-201ENST00000379516 ATP9AO75110 1047 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 NR3C2P08235 984 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 HOXD13P35453 343 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 XRRA1Q6P2D8 792 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 VSIG10LQ86VR7 867 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 TSC1Q92574 1164 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 ACAD9Q9H845 621 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 PARVGQ9HBI0 331 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 TRAF3IP3Q9Y228 551 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
SNX2-201ENST00000379516 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
SNX2-201ENST00000379516 NR2F2P24468 414 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 ZBED6P86452 979 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 BMT2Q1RMZ1 405 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 FIGNQ5HY92 759 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
SNX2-201ENST00000379516 ZNF397Q8NF99 534 aaPredicted RBP16.61■□□□□ 0.25
SNX2-201ENST00000379516 MMRN2Q9H8L6 949 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 SIK3Q9Y2K2 1263 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 MYPNQ86TC9 1320 aa16.61■□□□□ 0.25
SNX2-201ENST00000379516 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
SNX2-201ENST00000379516 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
SNX2-201ENST00000379516 PDXKO00764 312 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms