RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
PCNA-201ENST00000379143 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
PCNA-201ENST00000379143 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
PCNA-201ENST00000379143 SCN10AQ9Y5Y9 1956 aa13.42□□□□□ -0.26
PCNA-201ENST00000379143 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
PCNA-201ENST00000379143 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
PCNA-201ENST00000379143 CHMP2AO43633 222 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCNA-201ENST00000379143 F13A1P00488 732 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 CDK7P50613 346 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 PSMC6P62333 389 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
PCNA-201ENST00000379143 ANKRD33Q7Z3H0 272 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 SESTD1Q86VW0 696 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 ATP6V0A1Q93050 837 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 GJA10Q969M2 543 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 TOX2Q96NM4 488 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 TMEM60Q9H2L4 133 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
PCNA-201ENST00000379143 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 GNAT1P11488 350 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCNA-201ENST00000379143 RTP1P59025 263 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 NUCB2P80303 420 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
PCNA-201ENST00000379143 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 DTHD1Q6ZMT9 781 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 CCDC60Q8IWA6 550 aaPredicted RBP13.4□□□□□ -0.26
PCNA-201ENST00000379143 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
PCNA-201ENST00000379143 ATP6V1DQ9Y5K8 247 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 MAFBQ9Y5Q3 323 aaPredicted RBP13.4□□□□□ -0.26
PCNA-201ENST00000379143 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 IGSF9BQ9UPX0 1349 aa13.4□□□□□ -0.26
PCNA-201ENST00000379143 EVI5O60447 810 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 BRD1O95696 1058 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 TECP42680 631 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 PKP1Q13835 747 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 PDIA5Q14554 519 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 EPHA7Q15375 998 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 SF3A1Q15459 793 aaKnown RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 TRIM60Q495X7 471 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 DPF3Q92784 378 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 PCYT2Q99447 389 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 ATP11BQ9Y2G3 1177 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 HBP1O60381 514 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 P4HBP07237 508 aaKnown RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 QARSP47897 775 aaKnown RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 PSMC5P62195 406 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 TLE2Q04725 743 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
PCNA-201ENST00000379143 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
PCNA-201ENST00000379143 MYH15Q9Y2K3 1946 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 C17orf102A2RUQ5 167 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 POTEMA6NI47 508 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 EML1O00423 815 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 CD4P01730 458 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 MARK3P27448 753 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 HOXC8P31273 242 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 PLCB4Q15147 1175 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 FOXD4L5Q5VV16 416 aaPredicted RBP13.38□□□□□ -0.27
PCNA-201ENST00000379143 HAUS3Q68CZ6 603 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 FOXD4L4Q8WXT5 416 aaPredicted RBP13.38□□□□□ -0.27
PCNA-201ENST00000379143 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
PCNA-201ENST00000379143 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms