RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 DUX4L2P0CJ85 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4L3P0CJ86 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4L4P0CJ87 422 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4L5P0CJ88 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4L6P0CJ89 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4L7P0CJ90 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 ACTN1P12814 892 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 CXCR5P32302 372 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
EXT1-201ENST00000378204 DUX4Q9UBX2 424 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 SNX1Q13596 522 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.165e-6■■■■■ 34.9
EXT1-201ENST00000378204 CCDC124Q96CT7 223 aaKnown RBP16.06■□□□□ 0.16
EXT1-201ENST00000378204 TLK1Q9UKI8 766 aa16.06■□□□□ 0.16
EXT1-201ENST00000378204 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
EXT1-201ENST00000378204 PPEF1O14829 653 aaPredicted RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 PYCARDQ9ULZ3 195 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 BMP3P12645 472 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 ZBED6P86452 979 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 LRRC63Q05C16 580 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 CALN1Q9BXU9 219 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 CCND2P30279 289 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 TSTA3Q13630 321 aaPredicted RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 ENOX1Q8TC92 643 aaKnown RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 ARIH1Q9Y4X5 557 aaPredicted RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 BBOX1O75936 387 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 IFNAR1P17181 557 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 ALS2CLQ60I27 953 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 ANLNQ9NQW6 1124 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 ELF1P32519 619 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 ZC3H18Q86VM9 953 aaKnown RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 STAMBPL1Q96FJ0 436 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 CEP19Q96LK0 163 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
EXT1-201ENST00000378204 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
EXT1-201ENST00000378204 COBLO75128 1261 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 CASP2P42575 452 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 SURF1Q15526 300 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 THAP9Q9H5L6 903 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 ALCAMQ13740 583 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 MCUQ8NE86 351 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 NHEJ1Q9H9Q4 299 aaPredicted RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 CLIC2O15247 247 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 GFPT2O94808 682 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 EIF3BP55884 814 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 COPG1Q9Y678 874 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 WDR75Q8IWA0 830 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 PIP4K2CQ8TBX8 421 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 GNGT2O14610 69 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 NT5C2P49902 561 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 PUS3Q9BZE2 481 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 ZMYND10O75800 440 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 DARS2Q6PI48 645 aaKnown RBP16.04■□□□□ 0.16
EXT1-201ENST00000378204 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 CUL4AQ13619 759 aa16.04■□□□□ 0.16
EXT1-201ENST00000378204 YEATS2Q9ULM3 1422 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 TTI1O43156 1089 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 MXI1P50539 228 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.03■□□□□ 0.16
EXT1-201ENST00000378204 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 FAM8A1Q9UBU6 413 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 NDUFA10O95299 355 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 KIF23Q02241 960 aaPredicted RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 NR5A1Q13285 461 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 TMED2Q15363 201 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 AATKQ6ZMQ8 1374 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 MT-ND3P03897 115 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 ATP7BP35670 1465 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 DHX9Q08211 1270 aaKnown RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 LRRC41Q15345 812 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 C7orf31Q8N865 590 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 EXOC1LA0A1B0GW35 172 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 KRT1P04264 644 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 PLCG1P19174 1290 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 hCG_2014768A0A024R1R8 64 aa16.03■□□□□ 0.16
EXT1-201ENST00000378204 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 ARL6IP4Q66PJ3 421 aaKnown RBP16.03■□□□□ 0.16
EXT1-201ENST00000378204 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms