RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CALML6Q8TD86 181 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 OSBPL7Q9BZF2 842 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 STAMBPO95630 424 aa12.71□□□□□ -0.38
NPHP4-202ENST00000378161 RPL13P26373 211 aaKnown RBP12.71□□□□□ -0.38
NPHP4-202ENST00000378161 KIF22Q14807 665 aa12.71□□□□□ -0.38
NPHP4-202ENST00000378161 C6orf118Q5T5N4 469 aa12.71□□□□□ -0.38
NPHP4-202ENST00000378161 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.38
NPHP4-202ENST00000378161 NOX5Q96PH1 765 aa12.71□□□□□ -0.38
NPHP4-202ENST00000378161 C10orf88Q9H8K7 445 aa12.71□□□□□ -0.38
NPHP4-202ENST00000378161 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.38
NPHP4-202ENST00000378161 PFKFB1P16118 471 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 OXCT1P55809 520 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 EIF3BP55884 814 aaKnown RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 PDE4BQ07343 736 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 TUBA3CQ13748 450 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 KRT40Q6A162 431 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 VPS36Q86VN1 386 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 KRT12Q99456 494 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 USP15Q9Y4E8 981 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 CEP152O94986 1710 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 GSTTP1A0A1W2PQM5 241 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 A6NHS1 94 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 MFAP3LO75121 409 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 PIP4K2CQ8TBX8 421 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 RNPEPL1Q9HAU8 725 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 TRPA1O75762 1119 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 UBOX5O94941 541 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 CMA1P23946 247 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 GALK1P51570 392 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 DHX9Q08211 1270 aaKnown RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 ZNF444Q8N0Y2 327 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-202ENST00000378161 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 BHMT2Q9H2M3 363 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 ADCY9O60503 1353 aa12.7□□□□□ -0.38
NPHP4-202ENST00000378161 SFI1A8K8P3 1242 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 B4E1Z4 1266 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 NDUFA10O95299 355 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CYP7A1P22680 504 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 RGS2P41220 211 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 DCLRE1BQ9H816 532 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 AASDHPPTQ9NRN7 309 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 GOLGA8TH3BQL2 631 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 MATN2O00339 956 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CYTH3O43739 400 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 PEX14O75381 377 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ATP1A1P05023 1023 aaKnown RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 GOLGA8HP0CJ92 632 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CALM1P0DP23 149 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CALM2P0DP24 149 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CALM3P0DP25 149 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ERCC5P28715 1186 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ZFYVE27Q5T4F4 411 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 SEPT11Q9NVA2 429 aaKnown RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ARL2BPQ9Y2Y0 163 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ITIH6Q6UXX5 1313 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 CYP21A2P08686 494 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 ATICP31939 592 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 STAT2P52630 851 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 BPIFB4P59827 614 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 MED21Q13503 144 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 LRIG3Q6UXM1 1119 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 PAGR1Q9BTK6 254 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 DEXIO95424 95 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
NPHP4-202ENST00000378161 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 KRT2P35908 639 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 RESTQ13127 1097 aa12.69□□□□□ -0.38
NPHP4-202ENST00000378161 TNIP1Q15025 636 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms