RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 EPN1Q9Y6I3 576 aaPredicted RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 ZNF185O15231 689 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 MSH4O15457 936 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 ZNF500O60304 480 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 EIF4A3P38919 411 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CASP5P51878 434 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 POLGP54098 1239 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 MAP2K1Q02750 393 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 GRB10Q13322 594 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 KIAA0753Q2KHM9 967 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 PDXDC2PQ6P474 469 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 RAD9BQ6WBX8 426 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 LRRC71Q8N4P6 559 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 NDST4Q9H3R1 872 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 SPON1Q9HCB6 807 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 MRPL42Q9Y6G3 142 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 POTEB2H3BUK9 544 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 RNF225M0QZC1 329 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CD19P15391 556 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 HMGB2P26583 209 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 GTF2F1P35269 517 aaKnown RBP eCLIP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 TRAPPC10P48553 1259 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 ETF1P62495 437 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CCZ1BP86790 482 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CCZ1P86791 482 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 TTC19Q6DKK2 380 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CCDC70Q6NSX1 233 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 PRPF38AQ8NAV1 312 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 FAM151AQ8WW52 585 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 FNBP1Q96RU3 617 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 POP1Q99575 1024 aaKnown RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 VCPKMTQ9H867 229 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 SERPINA10Q9UK55 444 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 HPSEQ9Y251 543 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 RIPK3Q9Y572 518 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 LRRC53A6NM62 1247 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 SLC9A1P19634 815 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CAP2P40123 477 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 NPY5RQ15761 445 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CEP55Q53EZ4 464 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 DCAF15Q66K64 600 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 PPP4R3AQ6IN85 833 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 CAPN12Q6ZSI9 719 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 PI4K2AQ9BTU6 479 aa8.91□□□□□ -0.98
CKAP2-203ENST00000378037 ZNF646O15015 1829 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-203ENST00000378037 ESYT3A0FGR9 886 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 FGFR1OPO95684 399 aaKnown RBP8.9□□□□□ -0.98
CKAP2-203ENST00000378037 VCAM1P19320 739 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 ACOT2P49753 483 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 IFRD2Q12894 506 aaPredicted RBP8.9□□□□□ -0.98
CKAP2-203ENST00000378037 DPP9Q86TI2 863 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 PRM3Q9NNZ6 103 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 KCNH7Q9NS40 1196 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 NXF1Q9UBU9 619 aaKnown RBP8.9□□□□□ -0.98
CKAP2-203ENST00000378037 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 WDR19Q8NEZ3 1342 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE15A4D2H0 777 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 KRT86O43790 486 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE8P0CG41 777 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 CCNE1P24864 410 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 GUCY2FP51841 1108 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE6Q86UF2 777 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE4Q8IX94 777 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 RAD54LQ92698 747 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 TIGD1Q96MW7 591 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 NT5C3AQ9H0P0 336 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 RIC8AQ9NPQ8 531 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 PLCB1Q9NQ66 1216 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 DNAJC17Q9NVM6 304 aaKnown RBP8.9□□□□□ -0.98
CKAP2-203ENST00000378037 GCNT4Q9P109 453 aa8.9□□□□□ -0.98
CKAP2-203ENST00000378037 TLDC2A0PJX2 215 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 CEP104O60308 925 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 ORC1Q13415 861 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 NAALADL2Q58DX5 795 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 PADI6Q6TGC4 694 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 CYP26C1Q6V0L0 522 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.9□□□□□ -0.99
CKAP2-203ENST00000378037 TRAPPC12Q8WVT3 735 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 SLC10A4Q96EP9 437 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 CAMKK2Q96RR4 588 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 ZCCHC17Q9NP64 241 aaKnown RBP8.9□□□□□ -0.99
CKAP2-203ENST00000378037 PCDH10Q9P2E7 1040 aa8.9□□□□□ -0.99
CKAP2-203ENST00000378037 ZNF541Q9H0D2 1346 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
CKAP2-203ENST00000378037 SYNJ2BP-COX16A0A087WUM0 186 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 CCP110O43303 1012 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 GYPCP04921 128 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 TMOD1P28289 359 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 ADCY1Q08828 1119 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 STYK1Q6J9G0 422 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 CERS3Q8IU89 383 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 MYRIPQ8NFW9 859 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 PYM1Q9BRP8 204 aaKnown RBP8.89□□□□□ -0.99
CKAP2-203ENST00000378037 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 SYNCQ9H7C4 482 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 INTS13Q9NVM9 706 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 COX16Q9P0S2 106 aa8.89□□□□□ -0.99
CKAP2-203ENST00000378037 TUBE1Q9UJT0 475 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms