RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KCNH7Q9NS40 1196 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 TCEAL9Q9UHQ7 104 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 TRPC6Q9Y210 931 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 TRANK1O15050 2925 aa16.83■□□□□ 0.29
HDAC6-204ENST00000376643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-204ENST00000376643 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 H3BNC9 293 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 CHRNA1P02708 482 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 GHRP10912 638 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 ZNF76P36508 570 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 ODR4Q5SWX8 454 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 RAB11FIP4Q86YS3 637 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 TMEM192Q8IY95 271 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 NME8Q8N427 588 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 KAT6AQ92794 2004 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 C17orf80Q9BSJ5 609 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-204ENST00000376643 ANO3Q9BYT9 981 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 LMAN2LQ9H0V9 348 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 UBE2ZQ9H832 354 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-204ENST00000376643 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
HDAC6-204ENST00000376643 hCG_1642624A0A1W2PR95 340 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 SREBF1P36956 1147 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 STAT5BP51692 787 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 MRPS6P82932 125 aaKnown RBP16.82■□□□□ 0.28
HDAC6-204ENST00000376643 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
HDAC6-204ENST00000376643 MGAT3Q09327 533 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 GPM6BQ13491 265 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 FAM160B1Q5W0V3 765 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 DNAJB3Q8WWF6 145 aa16.82■□□□□ 0.28
HDAC6-204ENST00000376643 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-204ENST00000376643 ADGRA3Q8IWK6 1321 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 STAG3L1P0CL83 205 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 COL9A1P20849 921 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 ACTR2P61160 394 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 SETQ01105 290 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-204ENST00000376643 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
HDAC6-204ENST00000376643 FBXO47Q5MNV8 452 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 BANK1Q8NDB2 785 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 PPP2R3CQ969Q6 453 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 NSUN3Q9H649 340 aaKnown RBP16.81■□□□□ 0.28
HDAC6-204ENST00000376643 PCDHA2Q9Y5H9 948 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 CDY2AQ9Y6F7 541 aa16.81■□□□□ 0.28
HDAC6-204ENST00000376643 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-204ENST00000376643 ESYT2A0FGR8 921 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 C5orf67F2Z3F1 127 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 STXBP3O00186 592 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 INSRRP14616 1297 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 GNA11P29992 359 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 CTNNB1P35222 781 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDAC6-204ENST00000376643 IGBP1P78318 339 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 LPIN1Q14693 890 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-204ENST00000376643 PLVAPQ9BX97 442 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 AGO4Q9HCK5 861 aaKnown RBP16.8■□□□□ 0.28
HDAC6-204ENST00000376643 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
HDAC6-204ENST00000376643 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-204ENST00000376643 COL1A2P08123 1366 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 SMIM35A0A1B0GVV1 85 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 POTEB3A0JP26 581 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 MEIS1O00470 390 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 BACH1O14867 736 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 HBP1O60381 514 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 KCNA5P22460 613 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 PAK2Q13177 524 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 BTG3Q14201 252 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-204ENST00000376643 PFKFB3Q16875 520 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-204ENST00000376643 NAALADL2Q58DX5 795 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 MARCH8Q5T0T0 291 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 MIS18BP1Q6P0N0 1132 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 POTEBQ6S5H4 581 aa16.79■□□□□ 0.28
HDAC6-204ENST00000376643 FAM49AQ9H0Q0 323 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-204ENST00000376643 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 KDM3AQ9Y4C1 1321 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 ENPP3O14638 875 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 REC8O95072 547 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 ATG7O95352 703 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 SCG2P13521 617 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 PSMA5P28066 241 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 BMPR1AP36894 532 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
HDAC6-204ENST00000376643 FUT2Q10981 343 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 NPAS4Q8IUM7 802 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 CMTR2Q8IYT2 770 aaKnown RBP16.78■□□□□ 0.28
HDAC6-204ENST00000376643 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms