RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 FAM118BQ9BPY3 351 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 EML1O00423 815 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 SPOPO43791 374 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 INPP5BP32019 993 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 HMGCS2P54868 508 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 MTMR2Q13614 643 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 RHOBTB3O94955 611 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 SNX1Q13596 522 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 RPS6KA1Q15418 735 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.36
DDR1-227ENST00000376570 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 RETREG2Q8NC44 543 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 TNFRSF25Q93038 417 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 UBE2TQ9NPD8 197 aaPredicted RBP12.77□□□□□ -0.36
DDR1-227ENST00000376570 PLCB1Q9NQ66 1216 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 NFU1Q9UMS0 254 aa12.77□□□□□ -0.36
DDR1-227ENST00000376570 NFIBO00712 420 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 FANCGO15287 622 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 JAG1P78504 1218 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 PASD1Q8IV76 773 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 LRRC1Q9BTT6 524 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
DDR1-227ENST00000376570 NUP58Q9BVL2 599 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 CALUO43852 315 aaPredicted RBP12.77□□□□□ -0.37
DDR1-227ENST00000376570 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 CETN1Q12798 172 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
DDR1-227ENST00000376570 CDKAL1Q5VV42 579 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 GADL1Q6ZQY3 521 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
DDR1-227ENST00000376570 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.37
DDR1-227ENST00000376570 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.37
DDR1-227ENST00000376570 NR3C1P04150 777 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 CASP8Q14790 479 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 NCAPG2Q86XI2 1143 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 EHMT1Q9H9B1 1298 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
DDR1-227ENST00000376570 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
DDR1-227ENST00000376570 MSH4O15457 936 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 HSF2BPO75031 334 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 ADRA2BP18089 450 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 ANKRD35Q8N283 1001 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 METTL13Q8N6R0 699 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 LXNQ9BS40 222 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 DDX47Q9H0S4 455 aaKnown RBP12.76□□□□□ -0.37
DDR1-227ENST00000376570 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 MYO1CO00159 1063 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 SASH3O75995 380 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 KRT19P08727 400 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 STAT1P42224 750 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 LIG3P49916 1009 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 HERVK_113P62684 666 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 ZBTB33Q86T24 672 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
DDR1-227ENST00000376570 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 ZNF70Q9UC06 446 aaPredicted RBP12.76□□□□□ -0.37
DDR1-227ENST00000376570 DISP2A7MBM2 1401 aa12.76□□□□□ -0.37
DDR1-227ENST00000376570 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 IL1R1P14778 569 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 POLD1P28340 1107 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 SLCO1A2P46721 670 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 POMGNT1Q8WZA1 660 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 HAS1Q92839 578 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 CCDC51Q96ER9 411 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 CEP170P1Q96L14 293 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 SELENOSQ9BQE4 189 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
DDR1-227ENST00000376570 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
DDR1-227ENST00000376570 LAD1O00515 517 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms