RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 S100A9P06702 114 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TSPY1Q01534 308 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 COA7Q96BR5 231 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TNNI1P19237 187 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TECP42680 631 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TFDP1Q14186 410 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 DYNLL2Q96FJ2 89 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 CNOT10Q9H9A5 744 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZNF215Q9UL58 517 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 G3BP2Q9UN86 482 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 TPD52L2O43399 206 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 PRKAB2O43741 272 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 Q3C1V9 767 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 TMEM259Q4ZIN3 620 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 MIS18BP1Q6P0N0 1132 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 TAB2Q9NYJ8 693 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 AKT3Q9Y243 479 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZHX2Q9Y6X8 837 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 H0YCG3 227 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 GRK7Q8WTQ7 553 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 HACL1Q9UJ83 578 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 MAPK8IP1Q9UQF2 711 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 CDHR2Q9BYE9 1310 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 GPBP1Q86WP2 473 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 XPO4Q9C0E2 1151 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 DIP2AQ14689 1571 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 EIF3CLB5ME19 914 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 HMGB3O15347 200 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 HLA-DPA1P20036 260 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 MAGEA1P43355 309 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 EIF3CQ99613 913 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRIM56Q9BRZ2 755 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 SEPT9Q9UHD8 586 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 PRR23D1E9PI22 279 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 PRR23D2P0DMB1 279 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 ATF7P17544 494 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 INAQ16352 499 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZC3H12BQ5HYM0 836 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 ATG16L1Q676U5 607 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRIM63Q969Q1 353 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 SPATA17Q96L03 361 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 MED10Q9BTT4 135 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 UPF3AQ9H1J1 476 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 KLHL31Q9H511 634 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
RAPGEF1-202ENST00000372190 GSTA1P08263 222 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 GSTA2P09210 222 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 MSH2P43246 934 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 ARHGDIAP52565 204 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 LONRF2Q1L5Z9 754 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 PEX26Q7Z412 305 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 LINC00116Q8NCU8 138 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 JAK2O60674 1132 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 RABGGTAQ92696 567 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 RPS6KC1Q96S38 1066 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 SLF1Q9BQI6 1058 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 FAM167BQ9BTA0 163 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 RAD21L1Q9H4I0 556 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 GSTA4O15217 222 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 DAPK3O43293 454 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 MFSD4BQ5TF39 518 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 ZNF577Q9BSK1 485 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 TM6SF1Q9BZW5 370 aa15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
RAPGEF1-202ENST00000372190 ENO4A6NNW6 628 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 CDK8P49336 464 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 NELFBQ8WX92 580 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 CNBD2Q96M20 576 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 DMP1Q13316 513 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 THAP11Q96EK4 314 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 PIH1D3Q9NQM4 214 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 DCDC2Q9UHG0 476 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 CAPN1P07384 714 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 GRK2P25098 689 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 CASP2P42575 452 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 YWHAEP62258 255 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 STRIP2Q9ULQ0 834 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 HYOU1Q9Y4L1 999 aa15.13■□□□□ 0.01
RAPGEF1-202ENST00000372190 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms