RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZNF18P17022 549 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 MSTO1Q9BUK6 570 aa23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 RPF1Q9H9Y2 349 aaKnown RBP23.89■■□□□ 1.42
TM9SF3-201ENST00000371142 GSTA4O15217 222 aa23.89■■□□□ 1.41
TM9SF3-201ENST00000371142 EVI5O60447 810 aa23.89■■□□□ 1.41
TM9SF3-201ENST00000371142 NNTQ13423 1086 aa23.89■■□□□ 1.41
TM9SF3-201ENST00000371142 NDST4Q9H3R1 872 aa23.89■■□□□ 1.41
TM9SF3-201ENST00000371142 PLS3P13797 630 aa23.89■■□□□ 1.41
TM9SF3-201ENST00000371142 DR1Q01658 176 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 BBS9Q3SYG4 887 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ANKRD20A4Q4UJ75 823 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ANKRD20A8PQ5CZ79 823 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ANKRD20A2Q5SQ80 823 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ANKRD20A1Q5TYW2 823 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ARMC9Q7Z3E5 817 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 NOVA2Q9UNW9 492 aaKnown RBP23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 METP08581 1390 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 EXOC1LA0A1B0GW35 172 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 FGD4Q96M96 766 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 ATG3Q9NT62 314 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 FAF1Q9UNN5 650 aaPredicted RBP23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 PEX19P40855 299 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 PDCD7Q8N8D1 485 aaKnown RBP23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 WHAMMQ8TF30 809 aa23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
TM9SF3-201ENST00000371142 SEPT2Q15019 361 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 PPP1R2P3Q6NXS1 205 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 LUC7L3O95232 432 aaKnown RBP23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 E2F5Q15329 346 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 SPDYE1Q8NFV5 336 aaPredicted RBP23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 PARD6BQ9BYG5 372 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 PEX3P56589 373 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 CUL4AQ13619 759 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 NUDCD1Q96RS6 583 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 MB21D1Q8N884 522 aa23.87■■□□□ 1.41
TM9SF3-201ENST00000371142 ATP8B3O60423 1300 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 BNIP3LO60238 219 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 NCF2P19878 526 aaPredicted RBP23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 ANXA13P27216 316 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 GINM1Q9NU53 330 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 CDC26Q8NHZ8 85 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 BHMT2Q9H2M3 363 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 SUSD4Q5VX71 490 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 ABCD1P33897 745 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 RNF139Q8WU17 664 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 ZNF341Q9BYN7 854 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 INPP5FQ9Y2H2 1132 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 EPHB1P54762 984 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 MRPS25P82663 173 aaKnown RBP23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 RSBN1LQ6PCB5 846 aaPredicted RBP23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 PIGOQ8TEQ8 1089 aa23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 XAB2Q9HCS7 855 aaKnown RBP23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 OLA1Q9NTK5 396 aaKnown RBP23.86■■□□□ 1.41
TM9SF3-201ENST00000371142 SOX5P35711 763 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 KRT31Q15323 416 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 CCHCR1Q8TD31 782 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 RASGRF2O14827 1237 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 SLMAPQ14BN4 828 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 TTC1Q99614 292 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 HEG1Q9ULI3 1381 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 SASH1O94885 1247 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 ZBED1O96006 694 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 SH3RF3Q8TEJ3 882 aaPredicted RBP23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 ORC6Q9Y5N6 252 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 KDM5DQ9BY66 1539 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 PPFIA2O75334 1257 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 ATP1A3P13637 1013 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 DSTYKQ6XUX3 929 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 EXT2Q93063 718 aa23.85■■□□□ 1.41
TM9SF3-201ENST00000371142 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 FOXD4Q12950 439 aaPredicted RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 FAM160B2Q86V87 743 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 GRAPQ13588 217 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 ZNF449Q6P9G9 518 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 GRAPLQ8TC17 118 aaPredicted RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 FMO2Q99518 471 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 ZMYND12Q9H0C1 365 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 FAM49AQ9H0Q0 323 aaPredicted RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 K7ERI5 159 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 NEK9Q8TD19 979 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 KLHL29Q96CT2 875 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 CFLARO15519 480 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 PSMA2P25787 234 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 KPNA2P52292 529 aaKnown RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 NKX1-1Q15270 411 aaPredicted RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 ERICH1Q86X53 443 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 MAML1Q92585 1016 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 IRAK4Q9NWZ3 460 aa23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 RRP15Q9Y3B9 282 aaKnown RBP23.84■■□□□ 1.41
TM9SF3-201ENST00000371142 TRPA1O75762 1119 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 HSPA6P17066 643 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 SLFNL1Q499Z3 407 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 RWDD4Q6NW29 188 aaKnown RBP23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 ALKBH8Q96BT7 664 aaKnown RBP23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 PANX2Q96RD6 677 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 RNF14Q9UBS8 474 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 ERVV-1B6SEH8 477 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms