RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 CPT1AP50416 773 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 GJA9P57773 515 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 NBR1Q14596 966 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 XIRP2A4UGR9 3374 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 MSH4O15457 936 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 MAFGO15525 162 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 CHMP2AO43633 222 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 STX6O43752 255 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 SLC37A4O43826 429 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 KCNA2P16389 499 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.474e-7■■■□□ 15.2
EXOSC1-203ENST00000370886 CIITAP33076 1130 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 CYP2C18P33260 490 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 KCNQ1P51787 676 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 TFF2Q03403 129 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 ITGB3BPQ13352 177 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 TTC38Q5R3I4 469 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 CXCL17Q6UXB2 119 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 NIPA1Q7RTP0 329 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 JPH1Q9HDC5 661 aaPredicted RBP12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 COG5Q9UP83 839 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 Q9Y3F1 56 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 TELO2Q9Y4R8 837 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 TRANK1O15050 2925 aa12.1□□□□□ -0.47
EXOSC1-203ENST00000370886 MYH6P13533 1939 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 WNT7AO00755 349 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CTAGE5O15320 804 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 NEMFO60524 1076 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 GAS7O60861 476 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CABYRO75952 493 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CD4P01730 458 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CYP3A7P24462 503 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 PSMC6P62333 389 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 CALCRLQ16602 461 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 Q4G0T1 1027 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 LRCH2Q5VUJ6 765 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 LENG9Q96B70 501 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 SENP7Q9BQF6 1050 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 REV3LO60673 3130 aa12.09□□□□□ -0.47
EXOSC1-203ENST00000370886 A6NJR5 290 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 ZBBXA8MT70 800 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 MMP3P08254 477 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 ZNF286BP0CG31 522 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 TXKP42681 527 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 DGKDQ16760 1214 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 FAM173BQ6P4H8 233 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 MOXD1Q6UVY6 613 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 GLG1Q92896 1179 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 GPR20Q99678 358 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 PCDHB6Q9Y5E3 794 aa12.08□□□□□ -0.48
EXOSC1-203ENST00000370886 BACH1O14867 736 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 GPR37L1O60883 481 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 CCNE2O96020 404 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 PFKMP08237 780 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 ATP2A2P16615 1042 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 TOB1P50616 345 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 RABGGTBP53611 331 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 ACTR2P61160 394 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 CEBPZQ03701 1054 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 RESTQ13127 1097 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 PKP1Q13835 747 aa12.07□□□□□ -0.48
EXOSC1-203ENST00000370886 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms