RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CYP4A11Q02928 519 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 PLCB4Q15147 1175 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 NANOGNBQ7Z5D8 188 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 GYPCP04921 128 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANKRD20A4Q4UJ75 823 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANKRD20A8PQ5CZ79 823 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANKRD20A2Q5SQ80 823 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANKRD20A1Q5TYW2 823 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 B4GALNT2Q8NHY0 566 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
GPC4-201ENST00000370828 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.68□□□□□ -0.22
GPC4-201ENST00000370828 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 CFLARO15519 480 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 USH1GQ495M9 461 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 TUBA8Q9NY65 449 aaPredicted RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 ZWINTO95229 277 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 CNGA1P29973 690 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 MAPK4P31152 587 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 BCAMP50895 628 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 TTBK2Q6IQ55 1244 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 AFAP1L2Q8N4X5 818 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 CCT6BQ92526 530 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 OLFM3Q96PB7 478 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPC4-201ENST00000370828 PARVBQ9HBI1 364 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 PODXLO00592 558 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 CDC27P30260 824 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 LIFRP42702 1097 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 GJA8P48165 433 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPC4-201ENST00000370828 WDR93Q6P2C0 686 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 RGS9BPQ6ZS82 235 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 APLFQ8IW19 511 aaPredicted RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 DNAJC9Q8WXX5 260 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 LZICQ8WZA0 190 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 LRGUKQ96M69 825 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 AK8Q96MA6 479 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 RHBDL2Q9NX52 303 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
GPC4-201ENST00000370828 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
GPC4-201ENST00000370828 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
GPC4-201ENST00000370828 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 EXOC7Q9UPT5 735 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 PSMD14O00487 310 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 TOM1L1O75674 476 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 EPHB1P54762 984 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 MMEL1Q495T6 779 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 KAT6BQ8WYB5 2073 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 ADD2P35612 726 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 MYL7Q01449 175 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 ASPHQ12797 758 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 STAMBPL1Q96FJ0 436 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 TNNI1P19237 187 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 FGFR4P22455 802 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 SCTRP47872 440 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 MRPS35P82673 323 aaKnown RBP13.66□□□□□ -0.22
GPC4-201ENST00000370828 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 EHD4Q9H223 541 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
GPC4-201ENST00000370828 TOM1O60784 492 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 FAM186BQ8IYM0 893 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 LAD1O00515 517 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 MGEA5O60502 916 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 GNAT1P11488 350 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 GALNT17Q6IS24 598 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 TEX9Q8N6V9 391 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 SNRNP27Q8WVK2 155 aaKnown RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 EIF2AQ9BY44 585 aaKnown RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 FGFR1OP2Q9NVK5 253 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms