RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CHMP4BP1P59074 171 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 WDR5P61964 334 aaKnown RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 ZNF200P98182 395 aaPredicted RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 TAP1Q03518 808 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 SKIV2LQ15477 1246 aaKnown RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 TCTN1Q2MV58 587 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 ZFP91Q96JP5 570 aaPredicted RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 GPR20Q99678 358 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 TUT1Q9H6E5 874 aaKnown RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 MLXIPQ9HAP2 919 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
LMO4-201ENST00000370542 ABHD14A-ACY1A0A1B0GW23 586 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 EFCAB14O75071 495 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 ADAM17P78536 824 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 ZNF618Q5T7W0 954 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 FBXL18Q96ME1 805 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 MTCH2Q9Y6C9 303 aa16.93■□□□□ 0.3
LMO4-201ENST00000370542 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 UBE2HP62256 183 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 FAM193AP78312 1265 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 PKP1Q13835 747 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 TMTC3Q6ZXV5 915 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 TEX2Q8IWB9 1127 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 RNPEPQ9H4A4 650 aa16.92■□□□□ 0.3
LMO4-201ENST00000370542 SEC63Q9UGP8 760 aaKnown RBP16.92■□□□□ 0.3
LMO4-201ENST00000370542 EPOPA6NHQ4 379 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 CAND2O75155 1236 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 GJB5O95377 273 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 EXOSC10Q01780 885 aaKnown RBP16.91■□□□□ 0.3
LMO4-201ENST00000370542 CYFIP1Q7L576 1253 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 SMARCC2Q8TAQ2 1214 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 CUL5Q93034 780 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 RTEL1Q9NZ71 1219 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 USP34Q70CQ2 3546 aa16.91■□□□□ 0.3
LMO4-201ENST00000370542 C17orf102A2RUQ5 167 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 SORBS3O60504 671 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 LGR5O75473 907 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 SMIM10L2AP0DMW4 78 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 SMIM10L2BP0DMW5 78 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 KCNJ6P48051 423 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 DEFB103AP81534 67 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 CMTR1Q8N1G2 835 aaKnown RBP16.9■□□□□ 0.3
LMO4-201ENST00000370542 GIMAP8Q8ND71 665 aaPredicted RBP16.9■□□□□ 0.3
LMO4-201ENST00000370542 ATP6V0A1Q93050 837 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 HLA-CQ95604 372 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 PSTPIP2Q9H939 334 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 TELO2Q9Y4R8 837 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
LMO4-201ENST00000370542 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 DOCK5Q9H7D0 1870 aa16.9■□□□□ 0.3
LMO4-201ENST00000370542 NOP56O00567 594 aaKnown RBP16.89■□□□□ 0.29
LMO4-201ENST00000370542 MAFGO15525 162 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 TREHO43280 583 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 LPXNO60711 386 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 KCNA2P16389 499 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
LMO4-201ENST00000370542 ITGB5P18084 799 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 RXRAP19793 462 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 FOXK2Q01167 660 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 FUT2Q10981 343 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 IKBKEQ14164 716 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 PLEKHG4Q58EX7 1191 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 NLRX1Q86UT6 975 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 CDHR1Q96JP9 859 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 RAD9AQ99638 391 aa16.89■□□□□ 0.29
LMO4-201ENST00000370542 MICAL3Q7RTP6 2002 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 RFXAPO00287 272 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 ATP9AO75110 1047 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 ADCY5O95622 1261 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 FAM26DQ5JW98 314 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 APOA5Q6Q788 366 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 NEK1Q96PY6 1258 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 LMCD1Q9NZU5 365 aa16.88■□□□□ 0.29
LMO4-201ENST00000370542 GNAT1P11488 350 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 THPOP40225 353 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 RCAN1P53805 252 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
LMO4-201ENST00000370542 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
LMO4-201ENST00000370542 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms