RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MYH15Q9Y2K3 1946 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 H0YGN5 161 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 ATG7O95352 703 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
COL9A1-204ENST00000370496 SLC26A2P50443 739 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 PTGISQ16647 500 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 GDF6Q6KF10 455 aaPredicted RBP16.72■□□□□ 0.27
COL9A1-204ENST00000370496 PDXDC2PQ6P474 469 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 RDM1Q8NG50 284 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 HAS1Q92839 578 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 PCYT2Q99447 389 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 VAV3Q9UKW4 847 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
COL9A1-204ENST00000370496 IGSF9BQ9UPX0 1349 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 C17orf102A2RUQ5 167 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 STX6O43752 255 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 CD4P01730 458 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 OR52Z1P0C646 297 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 PPFIA1Q13136 1202 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 PPP2R5CQ13362 524 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 PLPPR4Q7Z2D5 763 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 SH3RF1Q7Z6J0 888 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 GABBR1Q9UBS5 961 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 TBX21Q9UL17 535 aa16.71■□□□□ 0.27
COL9A1-204ENST00000370496 IGKV6D-21A0A0A0MT36 114 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 GNAT1P11488 350 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 RAG1P15918 1043 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 TXKP42681 527 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-204ENST00000370496 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 LMBR1Q8WVP7 490 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
COL9A1-204ENST00000370496 ATP6V0A1Q93050 837 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 LBHD1Q9BQE6 289 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-204ENST00000370496 PPP1R12CQ9BZL4 782 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-204ENST00000370496 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
COL9A1-204ENST00000370496 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 KIAA0355O15063 1070 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 CYP2C9P11712 490 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 IGBP1P78318 339 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 PRKCEQ02156 737 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 PLCB4Q15147 1175 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 GRIK4Q16099 956 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 TMEM266Q2M3C6 531 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
COL9A1-204ENST00000370496 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 B3GNT9Q6UX72 402 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 TRIM43Q96BQ3 446 aaPredicted RBP16.69■□□□□ 0.26
COL9A1-204ENST00000370496 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 RNPEPQ9H4A4 650 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 SETD4Q9NVD3 440 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
COL9A1-204ENST00000370496 NRCAMQ92823 1304 aa16.69■□□□□ 0.26
COL9A1-204ENST00000370496 RESTQ13127 1097 aa16.68■□□□□ 0.26
COL9A1-204ENST00000370496 TRMT1LQ7Z2T5 733 aaKnown RBP16.68■□□□□ 0.26
COL9A1-204ENST00000370496 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
COL9A1-204ENST00000370496 ATP8B4Q8TF62 1192 aa16.68■□□□□ 0.26
COL9A1-204ENST00000370496 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
COL9A1-204ENST00000370496 CEP290O15078 2479 aa16.68■□□□□ 0.26
COL9A1-204ENST00000370496 EML1O00423 815 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 OATP04181 439 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 HOXC8P31273 242 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 ZNF200P98182 395 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 MDM2Q00987 491 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 SPIRE1Q08AE8 756 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 BFSP2Q13515 415 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 UGCGQ16739 394 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 TUBE1Q9UJT0 475 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 MAFBQ9Y5Q3 323 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-204ENST00000370496 ARID2Q68CP9 1835 aa16.67■□□□□ 0.26
COL9A1-204ENST00000370496 COL1A2P08123 1366 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 POTEMA6NI47 508 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 RRN3P2A6NIE6 340 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 LAD1O00515 517 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 HBP1O60381 514 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 TIMP1P01033 207 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
COL9A1-204ENST00000370496 INSRRP14616 1297 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 MAGEA10P43363 369 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-204ENST00000370496 PTGDRQ13258 359 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 PTK7Q13308 1070 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 HIC1Q14526 733 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 CAGE1Q8TC20 777 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 BBXQ8WY36 941 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-204ENST00000370496 LXNQ9BS40 222 aa16.66■□□□□ 0.26
COL9A1-204ENST00000370496 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms