RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ERMNQ8TAM6 284 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 HAS1Q92839 578 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 MTMR6Q9Y217 621 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 STK24Q9Y6E0 443 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 CEP290O15078 2479 aa15.49■□□□□ 0.07
SSR4-202ENST00000370085 NRCAMQ92823 1304 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 IGKV6D-21A0A0A0MT36 114 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 RRN3P2A6NIE6 340 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 MARK3P27448 753 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 PTGDRQ13258 359 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 PTGISQ16647 500 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 NCAPH2Q6IBW4 605 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 MTMR9Q96QG7 549 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 PRDM5Q9NQX1 630 aaPredicted RBP15.48■□□□□ 0.07
SSR4-202ENST00000370085 NRBP2Q9NSY0 501 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 GABBR1Q9UBS5 961 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 GTF2IRD1Q9UHL9 959 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 PCDHB6Q9Y5E3 794 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 ALPK3Q96L96 1907 aa15.48■□□□□ 0.07
SSR4-202ENST00000370085 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 POTEB3A0JP26 581 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 HBP1O60381 514 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 SMIM10L2AP0DMW4 78 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 SMIM10L2BP0DMW5 78 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 PRPHP41219 470 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 TOB1P50616 345 aaPredicted RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 PPFIA1Q13136 1202 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 EPHA7Q15375 998 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 POTEBQ6S5H4 581 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 DTHD1Q6ZMT9 781 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 CCDC60Q8IWA6 550 aaPredicted RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 GJA10Q969M2 543 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 ZNF396Q96N95 335 aaPredicted RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 HDAC6Q9UBN7 1215 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 VAV3Q9UKW4 847 aa15.47■□□□□ 0.07
SSR4-202ENST00000370085 MAFBQ9Y5Q3 323 aaPredicted RBP15.47■□□□□ 0.07
SSR4-202ENST00000370085 WNT7AO00755 349 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 B4GALT4O60513 344 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 CD4P01730 458 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 RPLP2P05387 115 aaKnown RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 P4HBP07237 508 aaKnown RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 RAG1P15918 1043 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 QARSP47897 775 aaKnown RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 PSMC5P62195 406 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 FAAP100Q0VG06 881 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 RESTQ13127 1097 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 BFSP2Q13515 415 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 NBR1Q14596 966 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 ARL6IP4Q66PJ3 421 aaKnown RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 PCYT2Q99447 389 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 LBHD1Q9BQE6 289 aaPredicted RBP15.46■□□□□ 0.07
SSR4-202ENST00000370085 TRPV6Q9H1D0 765 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 RNPEPQ9H4A4 650 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 TELO2Q9Y4R8 837 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 ATP6V1DQ9Y5K8 247 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 WDR81Q562E7 1941 aa15.46■□□□□ 0.07
SSR4-202ENST00000370085 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
SSR4-202ENST00000370085 IGSF9BQ9UPX0 1349 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 TECP42680 631 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
SSR4-202ENST00000370085 PDIA5Q14554 519 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 PLCB4Q15147 1175 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 GRIK4Q16099 956 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 ZNF484Q5JVG2 852 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 GDF6Q6KF10 455 aaPredicted RBP15.45■□□□□ 0.06
SSR4-202ENST00000370085 RSPH3Q86UC2 560 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 PDLIM7Q9NR12 457 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 TRMT13Q9NUP7 481 aaKnown RBP15.45■□□□□ 0.06
SSR4-202ENST00000370085 COL1A2P08123 1366 aa15.45■□□□□ 0.06
SSR4-202ENST00000370085 KIAA0355O15063 1070 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 F13A1P00488 732 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 OATP04181 439 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 INSRRP14616 1297 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 ATP2C1P98194 919 aaPredicted RBP15.44■□□□□ 0.06
SSR4-202ENST00000370085 PRKCEQ02156 737 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 PTK7Q13308 1070 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 XKR3Q5GH77 459 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 ATL3Q6DD88 541 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 OTUD6AQ7L8S5 288 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 RETREG2Q8NC44 543 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 CCDC43Q96MW1 224 aaKnown RBP15.44■□□□□ 0.06
SSR4-202ENST00000370085 HIPK3Q9H422 1215 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 LRWD1Q9UFC0 647 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 TUBE1Q9UJT0 475 aa15.44■□□□□ 0.06
SSR4-202ENST00000370085 IGBP1P78318 339 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms