RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PLPPR4Q7Z2D5 763 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 ZNF577Q9BSK1 485 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
CKS1B-203ENST00000368439 GJB4Q9NTQ9 266 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 KCNJ14Q9UNX9 436 aa21.53■■□□□ 1.04
CKS1B-203ENST00000368439 MYH9P35579 1960 aaKnown RBP21.52■■□□□ 1.04
CKS1B-203ENST00000368439 MBLAC1A4D2B0 266 aaPredicted RBP21.52■■□□□ 1.04
CKS1B-203ENST00000368439 ZBBXA8MT70 800 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 ACTN1P12814 892 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 PPFIA1Q13136 1202 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 GRIK4Q16099 956 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 TBCKQ8TEA7 893 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 TIFAQ96CG3 184 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 TBC1D22BQ9NU19 505 aa21.52■■□□□ 1.04
CKS1B-203ENST00000368439 RSPH10B2B2RC85 870 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 CAND2O75155 1236 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 RSPH10BP0C881 870 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 STAT5BP51692 787 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 PLCB4Q15147 1175 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 CNKSR3Q6P9H4 555 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 RUFY4Q6ZNE9 571 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 NSUN7Q8NE18 718 aaKnown RBP21.51■■□□□ 1.03
CKS1B-203ENST00000368439 C22orf23Q9BZE7 217 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 OSBPL7Q9BZF2 842 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 AZI2Q9H6S1 392 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 STXBP5LQ9Y2K9 1186 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 YBX2Q9Y2T7 364 aaKnown RBP21.51■■□□□ 1.03
CKS1B-203ENST00000368439 MICAL3Q7RTP6 2002 aa21.51■■□□□ 1.03
CKS1B-203ENST00000368439 CYP3A7-CYP3A51PA0A087WV96 503 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 MSH4O15457 936 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 BAIAP3O94812 1187 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 INSRRP14616 1297 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 ATP2A2P16615 1042 aaKnown RBP21.5■■□□□ 1.03
CKS1B-203ENST00000368439 CYP3A7P24462 503 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 FAM26DQ5JW98 314 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 RPAINQ86UA6 219 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
CKS1B-203ENST00000368439 MBOAT7Q96N66 472 aa21.5■■□□□ 1.03
CKS1B-203ENST00000368439 CDX2Q99626 313 aaPredicted RBP21.5■■□□□ 1.03
CKS1B-203ENST00000368439 ORC3Q9UBD5 711 aaPredicted RBP21.5■■□□□ 1.03
CKS1B-203ENST00000368439 RABGGTBP53611 331 aa21.49■■□□□ 1.03
CKS1B-203ENST00000368439 MKRN4PQ13434 485 aaPredicted RBP21.49■■□□□ 1.03
CKS1B-203ENST00000368439 RAB30Q15771 203 aa21.49■■□□□ 1.03
CKS1B-203ENST00000368439 Q4G0T1 1027 aa21.49■■□□□ 1.03
CKS1B-203ENST00000368439 ZNF746Q6NUN9 644 aaPredicted RBP21.49■■□□□ 1.03
CKS1B-203ENST00000368439 ZBTB10Q96DT7 871 aa21.49■■□□□ 1.03
CKS1B-203ENST00000368439 TDP2O95551 362 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 ATP4AP20648 1035 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 RBM25P49756 843 aaKnown RBP21.48■■□□□ 1.03
CKS1B-203ENST00000368439 SLC26A2P50443 739 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 WDR5P61964 334 aaKnown RBP21.48■■□□□ 1.03
CKS1B-203ENST00000368439 NONOQ15233 471 aaKnown RBP eCLIP21.48■■□□□ 1.03
CKS1B-203ENST00000368439 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 OXER1Q8TDS5 423 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 SLC5A5Q92911 643 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 SLC9A7Q96T83 725 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 ZNF576Q9H609 170 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 CHD7Q9P2D1 2997 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 TUBE1Q9UJT0 475 aa21.48■■□□□ 1.03
CKS1B-203ENST00000368439 RRN3P2A6NIE6 340 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 JAK2O60674 1132 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 CTSHP09668 335 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MYOGP15173 224 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 KRT76Q01546 638 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MGAT3Q09327 533 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 GRIN2CQ14957 1233 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 INF2Q27J81 1249 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 PLEKHG4Q58EX7 1191 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 SWSAP1Q6NVH7 229 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MIS18BP1Q6P0N0 1132 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 TAF2Q6P1X5 1199 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MOXD1Q6UVY6 613 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 KRT25Q7Z3Z0 450 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 SMAP1Q8IYB5 467 aaPredicted RBP21.47■■□□□ 1.03
CKS1B-203ENST00000368439 WASF1Q92558 559 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 RIT2Q99578 217 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 NKX2-4Q9H2Z4 354 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 ZNF302Q9NR11 478 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MSRAQ9UJ68 235 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 TRPC6Q9Y210 931 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 PCDHA11Q9Y5I1 949 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MAFBQ9Y5Q3 323 aaPredicted RBP21.47■■□□□ 1.03
CKS1B-203ENST00000368439 LOXHD1Q8IVV2 1947 aa21.47■■□□□ 1.03
CKS1B-203ENST00000368439 MYO9BQ13459 2157 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 ABHD14A-ACY1A0A1B0GW23 586 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 POTEB3A0JP26 581 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 CHRNA1P02708 482 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 XBP1P17861 261 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 IGBP1P78318 339 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 EARS2Q5JPH6 523 aaKnown RBP21.46■■□□□ 1.03
CKS1B-203ENST00000368439 FAM160B1Q5W0V3 765 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 POTEBQ6S5H4 581 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 DBF4BQ8NFT6 615 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 TRAPPC12Q8WVT3 735 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 GJA10Q969M2 543 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 LIMCH1Q9UPQ0 1083 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 PCDHA10Q9Y5I2 948 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 EVPLQ92817 2033 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 EYSQ5T1H1 3165 aa21.46■■□□□ 1.03
CKS1B-203ENST00000368439 BACH1O14867 736 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms