RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 CCDC155Q8N6L0 562 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 NSUN7Q8NE18 718 aaKnown RBP11.19□□□□□ -0.62
CD48-202ENST00000368046 GLG1Q92896 1179 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
CD48-202ENST00000368046 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 ZNF577Q9BSK1 485 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 WNT8AQ9H1J5 351 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SOX1O00570 391 aaPredicted RBP11.18□□□□□ -0.62
CD48-202ENST00000368046 LGR5O75473 907 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 ACRP10323 421 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 HOXC8P31273 242 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 RFC2P35250 354 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 STAT5BP51692 787 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
CD48-202ENST00000368046 RBL2Q08999 1139 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 HIC1Q14526 733 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
CD48-202ENST00000368046 PRR16Q569H4 304 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 PSRC1Q6PGN9 363 aaPredicted RBP11.18□□□□□ -0.62
CD48-202ENST00000368046 ABHD15Q6UXT9 468 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 AFAP1L1Q8TED9 768 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 ATP6V0A1Q93050 837 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SCLYQ96I15 445 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 PCYT2Q99447 389 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
CD48-202ENST00000368046 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
CD48-202ENST00000368046 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 SETD4Q9NVD3 440 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
CD48-202ENST00000368046 IGKV6D-21A0A0A0MT36 114 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
CD48-202ENST00000368046 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
CD48-202ENST00000368046 TREHO43280 583 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
CD48-202ENST00000368046 PFKMP08237 780 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 CKBP12277 381 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 SELPP16109 830 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 SLC26A2P50443 739 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 ADAM17P78536 824 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 Q4G0T1 1027 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 ZNF746Q6NUN9 644 aaPredicted RBP11.17□□□□□ -0.62
CD48-202ENST00000368046 MOXD1Q6UVY6 613 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 SERINC5Q86VE9 423 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 TRIM50Q86XT4 487 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 LENG9Q96B70 501 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
CD48-202ENST00000368046 RIT2Q99578 217 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 BRMS1Q9HCU9 246 aa11.17□□□□□ -0.62
CD48-202ENST00000368046 EMSYQ7Z589 1322 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 DDX39AO00148 427 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 MSH4O15457 936 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 JAK2O60674 1132 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 CCNE2O96020 404 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 SMAD3P84022 425 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 KRT76Q01546 638 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 TRIM29Q14134 588 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 INF2Q27J81 1249 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 TRIM71Q2Q1W2 868 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 RASIP1Q5U651 963 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 SWSAP1Q6NVH7 229 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 MIS18BP1Q6P0N0 1132 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 CCDC83Q8IWF9 413 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 VWCEQ96DN2 955 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 MBOAT7Q96N66 472 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 UIMC1Q96RL1 719 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
CD48-202ENST00000368046 PCDHA10Q9Y5I2 948 aa11.16□□□□□ -0.62
CD48-202ENST00000368046 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 BTBD18B2RXH4 712 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 MMP1P03956 469 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 ACTN1P12814 892 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 INSRRP14616 1297 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 MARK3P27448 753 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 KRT2P35908 639 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 HMGN5P82970 282 aaKnown RBP11.15□□□□□ -0.62
CD48-202ENST00000368046 GPNMBQ14956 572 aa11.15□□□□□ -0.62
CD48-202ENST00000368046 PLCB4Q15147 1175 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms