RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 NCAPGQ9BPX3 1015 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZC4H2Q9NQZ6 224 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TNS2Q63HR2 1409 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 MYO10Q9HD67 2058 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 LRRC10BA6NIK2 292 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 GYPCP04921 128 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PKN1Q16512 942 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 FRMD5Q7Z6J6 570 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 FAM186BQ8IYM0 893 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 BBOF1Q8ND07 529 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 FNBP1Q96RU3 617 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PALM3A6NDB9 673 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 KRIT1O00522 736 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ATP1A2P50993 1020 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SATB1Q01826 763 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PODNQ7Z5L7 613 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TADA2BQ86TJ2 420 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 KLHL7Q8IXQ5 586 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CEP95Q96GE4 821 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CXorf56Q9H5V9 222 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ATP6V0A2Q9Y487 856 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 RIC1Q4ADV7 1423 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 NPR1P16066 1061 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CYP2C19P33261 490 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 NAA30Q147X3 362 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ANKRD40Q6AI12 368 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ANO3Q9BYT9 981 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TRPC5Q9UL62 973 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 KDM3BQ7LBC6 1761 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPATA31A5Q5VU36 1347 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPATA31A7Q8IWB4 1347 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PITPNM2Q9BZ72 1349 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TRIM49BA6NDI0 452 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PGRMC1O00264 195 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 MOCS3O95396 460 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CCDC93Q567U6 631 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TTC19Q6DKK2 380 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 FOXR2Q6PJQ5 311 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TYW1Q9NV66 732 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 GPR75-ASB3A0A0A6YYF3 556 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 HMGB1P1B2RPK0 211 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPOPO43791 374 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 BAG2O95816 211 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CFBP00751 764 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 RFX1P22670 979 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 RHOT2Q8IXI1 618 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 U2AF1L4Q8WU68 220 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TRIM11Q96F44 468 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 TBC1D7Q9P0N9 293 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 LTN1O94822 1766 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CCDC169A6NNP5 214 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPECC1L-ADORA2AF8WAN1 911 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 GUCY2CP25092 1073 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 IFT88Q13099 833 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 VPS72Q15906 364 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 KBTBD4Q9NVX7 518 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 KLHL14Q9P2G3 628 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZBTB22O15209 634 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 FGRP09769 529 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CTNNA1P35221 906 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 DLGAP5Q15398 846 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDXDC1Q6P996 788 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SDCCAG8Q86SQ7 713 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CCDC24Q8N4L8 307 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 COG1Q8WTW3 980 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CENPKQ9BS16 269 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 SNX12Q9UMY4 172 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 HEXIM1O94992 359 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 PTPN21Q16825 1174 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 MOXD1Q6UVY6 613 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 TPH2Q8IWU9 490 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPATA20Q8TB22 786 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 WDR24Q96S15 920 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDXDC2PQ6P474 469 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 FERMT1Q9BQL6 677 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 PARVGQ9HBI0 331 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 AS3MTQ9HBK9 375 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 SRP68Q9UHB9 627 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDXKO00764 312 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 CASP1P29466 404 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 MFAP3P55082 362 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 C2orf54Q08AI8 447 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 HHATQ5VTY9 493 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 ARHGEF1Q92888 912 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 DTNBP1Q96EV8 351 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 ACCSQ96QU6 501 aa5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-204ENST00000366767 MAD2L2Q9UI95 211 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms