RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CEP170BQ9Y4F5 1589 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 ADSSL1Q8N142 457 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 PIGBQ92521 554 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 HNRNPDLO14979 420 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDKL2Q92772 493 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 SCINQ9Y6U3 715 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 NOP56O00567 594 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 HNRNPCL1O60812 293 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 NR3C1P04150 777 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 DEUP1Q05D60 604 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM20AQ96MK3 541 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 SENP1Q9P0U3 644 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 COL15A1P39059 1388 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 RNF8O76064 485 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 RHOBTB3O94955 611 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 INHBAP08476 426 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 PIGSQ96S52 555 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 PPCSQ9HAB8 311 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 SLC7A5Q01650 507 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 CTAGE3PQ8IX95 158 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 FER1L4A9Z1Z3 1794 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 IFNAR2P48551 515 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 TRIM4Q9C037 500 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 HPCAL4Q9UM19 191 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
CDC42BPA-202ENST00000366764 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 NOVA2Q9UNW9 492 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 GTF2IP78347 998 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 MYH3P11055 1940 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZBTB5O15062 677 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 KRT81Q14533 505 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 NLRP14Q86W24 1093 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 CNGA1P29973 690 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZCCHC17Q9NP64 241 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 SPATA31A3Q5VYP0 1347 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDK8P49336 464 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 XKR9Q5GH70 373 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 HIBCHQ6NVY1 386 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 SCOCQ9UIL1 159 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 PPP1R37O75864 691 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDC25AP30304 524 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 N4BP2L2Q92802 583 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-202ENST00000366764 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 HARSP12081 509 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CASC4Q6P4E1 433 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CSRNP1Q96S65 589 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 TNNC2P02585 160 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 STAT2P52630 851 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 COASYQ13057 564 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 MYH11P35749 1972 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 USP11P51784 963 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CYP4A11Q02928 519 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 BYSLQ13895 437 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 BANK1Q8NDB2 785 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 RFFLQ8WZ73 363 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 LTN1O94822 1766 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 GYPCP04921 128 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 KCNH2Q12809 1159 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 H0YIN7 160 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 GIPC1O14908 333 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 MCF2LO15068 1137 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms