RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
MRPL55-216ENST00000366744 GNL2Q13823 731 aaKnown RBP10.55□□□□□ -0.72
MRPL55-216ENST00000366744 GRIK4Q16099 956 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 LRCH2Q5VUJ6 765 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF746Q6NUN9 644 aaPredicted RBP10.55□□□□□ -0.72
MRPL55-216ENST00000366744 MOXD1Q6UVY6 613 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 CRYGNQ8WXF5 182 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 HERVK_113Q902F9 699 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 PHF20Q9BVI0 1012 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 BCAS3Q9H6U6 928 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF302Q9NR11 478 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 SETD4Q9NVD3 440 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 MSRAQ9UJ68 235 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 KCNJ14Q9UNX9 436 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 NLRC5Q86WI3 1866 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 GSTTP1A0A1W2PQM5 241 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 LGR5O75473 907 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 CTSHP09668 335 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 SFNP31947 248 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 CIITAP33076 1130 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 JAK3P52333 1124 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 IGBP1P78318 339 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
MRPL55-216ENST00000366744 INF2Q27J81 1249 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 LETM2Q2VYF4 491 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 CNKSR3Q6P9H4 555 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 CCDC83Q8IWF9 413 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
MRPL55-216ENST00000366744 SLC9A7Q96T83 725 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 RIT2Q99578 217 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 LLPHQ9BRT6 129 aaKnown RBP10.54□□□□□ -0.72
MRPL55-216ENST00000366744 RNPEPQ9H4A4 650 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
MRPL55-216ENST00000366744 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
MRPL55-216ENST00000366744 COL1A2P08123 1366 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 TREHO43280 583 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 CHMP2AO43633 222 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 TDP2O95551 362 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 ATP2A2P16615 1042 aaKnown RBP10.53□□□□□ -0.72
MRPL55-216ENST00000366744 DNAJB2P25686 324 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 HOXC8P31273 242 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 FOSBP53539 338 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-216ENST00000366744 Q4G0T1 1027 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 FAM109BQ6ICB4 259 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-216ENST00000366744 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 PIK3AP1Q6ZUJ8 805 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 NSUN7Q8NE18 718 aaKnown RBP10.53□□□□□ -0.72
MRPL55-216ENST00000366744 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 PCDHA10Q9Y5I2 948 aa10.53□□□□□ -0.72
MRPL55-216ENST00000366744 KIF28PB7ZC32 967 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 MSH4O15457 936 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 HBP1O60381 514 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 CCNT1O60563 726 aaKnown RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 JAK2O60674 1132 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 CTDNEP1O95476 244 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 CCNE2O96020 404 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 MMP1P03956 469 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 MCM2P49736 904 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 IKBKEQ14164 716 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 SWSAP1Q6NVH7 229 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 DIS3L2Q8IYB7 885 aaKnown RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 RDM1Q8NG50 284 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 SEPT8Q92599 483 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 C8orf76Q96K31 380 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 UIMC1Q96RL1 719 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 CTAGE1Q96RT6 745 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 SLC28A3Q9HAS3 691 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 DISC1Q9NRI5 854 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 TELO2Q9Y4R8 837 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 COL4A4P53420 1690 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-216ENST00000366744 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
MRPL55-216ENST00000366744 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 M0R2N6 131 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 DKC1O60832 514 aaKnown RBP eCLIP10.51□□□□□ -0.73
MRPL55-216ENST00000366744 AMHP03971 560 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 INSRRP14616 1297 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 PLCB4Q15147 1175 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 TRIM71Q2Q1W2 868 aaKnown RBP10.51□□□□□ -0.73
MRPL55-216ENST00000366744 ZNF484Q5JVG2 852 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 RASIP1Q5U651 963 aa10.51□□□□□ -0.73
MRPL55-216ENST00000366744 IER5Q5VY09 327 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms