RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 RPA1P27694 616 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 TCF7P36402 384 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 UBA7P41226 1012 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 RESP18Q5W5W9 173 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 KLHDC9Q8NEP7 349 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 ERMNQ8TAM6 284 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 PCYT2Q99447 389 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 POLR3CQ9BUI4 534 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 XPNPEP3Q9NQH7 507 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 GADD45BO75293 160 aaPredicted RBP13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 PGK1P00558 417 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 CPT1AP50416 773 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 FSCN1Q16658 493 aaKnown RBP13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 DGKDQ16760 1214 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 HYIQ5T013 277 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 CABP7Q86V35 215 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 CATSPER3Q86XQ3 398 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 AFAP1L1Q8TED9 768 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 DYDC2Q96IM9 177 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 TUFT1Q9NNX1 390 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 MAFBQ9Y5Q3 323 aaPredicted RBP13.92□□□□□ -0.18
NIF3L1-201ENST00000359683 MYADML2A6NDP7 307 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 MED24O75448 989 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 MUTP22033 750 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 CST5P28325 142 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 MCM4P33991 863 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 CCT6AP40227 531 aaKnown RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 BEX3Q00994 111 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 HAUS3Q68CZ6 603 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 CCSAPQ6IQ19 270 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 PLPPR4Q7Z2D5 763 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 EMSYQ7Z589 1322 aa13.91□□□□□ -0.18
NIF3L1-201ENST00000359683 KPNA6O60684 536 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 LYPLA2O95372 231 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 LGALS2P05162 132 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 GJB1P08034 283 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 STAT5BP51692 787 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 PSMC5P62195 406 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 UBE2HP62256 183 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 ECM1Q16610 540 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 UTP14CQ5TAP6 766 aaKnown RBP13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 FAM160B1Q5W0V3 765 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 DEFB118Q96PH6 123 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 PNMA5Q96PV4 448 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 SMARCAD1Q9H4L7 1026 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 WRAP73Q9P2S5 460 aaPredicted RBP13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 OGDHLQ9ULD0 1010 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 HPSEQ9Y251 543 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
NIF3L1-201ENST00000359683 BACH1O14867 736 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 ZNF862O60290 1169 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 ZEB2O60315 1214 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 STBD1O95210 358 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 ATP4AP20648 1035 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 TXLNAP40222 546 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 CYP4A11Q02928 519 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 GRB10Q13322 594 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 LRRC41Q15345 812 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 UGCGQ16739 394 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 RNF180Q86T96 592 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 TPH2Q8IWU9 490 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 C4orf19Q8IY42 314 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 FSIP1Q8NA03 581 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 BANK1Q8NDB2 785 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 CALML4Q96GE6 196 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 LXNQ9BS40 222 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.19
NIF3L1-201ENST00000359683 AZI2Q9H6S1 392 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms