RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ATP6V1G2O95670 118 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 STAT2P52630 851 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ARL4CP56559 192 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SNX16P57768 344 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CNGA3Q16281 694 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 BTBD7Q9P203 1132 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 RAB21Q9UL25 225 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SYCP2Q9BX26 1530 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MYL1P05976 194 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 HSPA9P38646 679 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CDC37Q16543 378 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 EDC3Q96F86 508 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 DBNLQ9UJU6 430 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 KDM3AQ9Y4C1 1321 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GIPC1O14908 333 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TTI1O43156 1089 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 APOA5Q6Q788 366 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 DDX47Q9H0S4 455 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TMEM165Q9HC07 324 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ARHGEF10O15013 1369 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MYH3P11055 1940 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GOLGA8QA0A0J9YX86 632 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GOLGA8OA6NCC3 632 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 E7ENQ6 273 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GOLGA8NF8WBI6 632 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ORC4O43929 436 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CCDC22O60826 627 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 LONP1P36776 959 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 INPP1P49441 399 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GRIN1Q05586 938 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 KIF22Q14807 665 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CYTH1Q15438 398 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ATG16L1Q676U5 607 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ATP6V0A1Q93050 837 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 OPTNQ96CV9 577 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 XAGE2Q96GT9 111 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TMOD3Q9NYL9 352 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 L1RE1Q9UN81 338 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MAD1L1Q9Y6D9 718 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GPC4O75487 556 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ATF3P18847 181 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 NSFP46459 744 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 BFSP1Q12934 665 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 RASGRP2Q7LDG7 609 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ZIM3Q96PE6 472 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TRAPPC9Q96Q05 1148 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 DDX20Q9UHI6 824 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MYH2Q9UKX2 1941 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GFPT2O94808 682 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ZRANB2O95218 330 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ANP32DO95626 131 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 RNF207Q6ZRF8 634 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 EAF2Q96CJ1 260 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MED23Q9ULK4 1368 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 PDE1BQ01064 536 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ROR2Q01974 943 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 PTGDRQ13258 359 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 FAM26FQ5R3K3 315 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CWF19L1Q69YN2 538 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 RAD9BQ6WBX8 426 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GLT8D2Q9H1C3 349 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SOS2Q07890 1332 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 LIN7AO14910 233 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ESRRBO95718 433 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 HSPD1P10809 573 aaKnown RBP6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SKOR1P84550 965 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 SEMA3FQ13275 785 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 LRRC14Q15048 493 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 GEN1Q17RS7 908 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 CC2D2BQ6DHV5 1058 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TC2NQ8N9U0 490 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MYH1P12882 1939 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 MYH4Q9Y623 1939 aa6.53□□□□□ -1.36
VPS13B-203ENST00000358544 TPD52L2O43399 206 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 CYP2J2P51589 502 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 MRPS15P82914 257 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 ADAM9Q13443 819 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 IRGCQ6NXR0 463 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 CCDC80Q76M96 950 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 CRLF3Q8IUI8 442 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 KLHL23Q8NBE8 558 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 THAP11Q96EK4 314 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 UPF3AQ9H1J1 476 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 RBM12Q9NTZ6 932 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 DNM3Q9UQ16 869 aa6.52□□□□□ -1.36
VPS13B-203ENST00000358544 NOC2LQ9Y3T9 749 aaKnown RBP6.52□□□□□ -1.36
VPS13B-203ENST00000358544 PLCG2P16885 1265 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 MYL7Q01449 175 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GFPT1Q06210 699 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GALNT17Q6IS24 598 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 STAG2Q8N3U4 1231 aa6.52□□□□□ -1.37
VPS13B-203ENST00000358544 SMCR8Q8TEV9 937 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 ZC3H15Q8WU90 426 aaKnown RBP6.52□□□□□ -1.37
VPS13B-203ENST00000358544 GPKOWQ92917 476 aaPredicted RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms