RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 DDX42Q86XP3 938 aaKnown RBP eCLIP9.34□□□□□ -0.91
GM2A-201ENST00000357164 ANKS1AQ92625 1134 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 GATA6Q92908 595 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 HES6Q96HZ4 224 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 CNOT7Q9UIV1 285 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 FAM205AQ6ZU69 1335 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 VEGFAP15692 232 aaPredicted RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 RASA1P20936 1047 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 STK4Q13043 487 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 RTN1Q16799 776 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 TTC38Q5R3I4 469 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 RBM41Q96IZ5 413 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 HAPLN3Q96S86 360 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 SYT11Q9BT88 431 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 DDX43Q9NXZ2 648 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
GM2A-201ENST00000357164 GRHL1Q9NZI5 618 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 SWAP70Q9UH65 585 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 NAV1Q8NEY1 1877 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 GREB1LQ9C091 1923 aaPredicted RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 EDIL3O43854 480 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 PENKP01210 267 aaPredicted RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 T-ENOLP0DO92 83 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 PYGBP11216 843 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 MYL6BP14649 208 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 PDE6AP16499 860 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 SP100P23497 879 aaPredicted RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 MSH2P43246 934 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
GM2A-201ENST00000357164 COPS2P61201 443 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 ZNF532Q9HCE3 1301 aa9.34□□□□□ -0.91
GM2A-201ENST00000357164 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
GM2A-201ENST00000357164 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 PPP1R7Q15435 360 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.33□□□□□ -0.92
GM2A-201ENST00000357164 GANQ9H2C0 597 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 LRMDAQ9H2I8 198 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 CNNM2Q9H8M5 875 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 NLRC4Q9NPP4 1024 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
GM2A-201ENST00000357164 ATF5Q9Y2D1 282 aaPredicted RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 FAM170AA1A519 330 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 EIF3BP55884 814 aaKnown RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 RNF43Q68DV7 783 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 VSTM1Q6UX27 236 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 TMC4Q7Z404 712 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 ANKRD23Q86SG2 305 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 COL23A1Q86Y22 540 aaPredicted RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 NOX5Q96PH1 765 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 RAB17Q9H0T7 212 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 PNMA2Q9UL42 364 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 EYA4O95677 639 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 GNAT1P11488 350 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 ATP2A2P16615 1042 aaKnown RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 ALDH3A1P30838 453 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 PDE6BP35913 854 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SLC39A6Q13433 755 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SLC18A3Q16572 532 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SLC35G1Q2M3R5 365 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 IRF2BP2Q7Z5L9 587 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 CCDC42Q96M95 316 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 TRAPPC9Q96Q05 1148 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 RUFY1Q96T51 708 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 STK32BQ9NY57 414 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 THRAP3Q9Y2W1 955 aaKnown RBP9.33□□□□□ -0.92
GM2A-201ENST00000357164 NUMBLQ9Y6R0 609 aa9.33□□□□□ -0.92
GM2A-201ENST00000357164 PTGIRP43119 386 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 APBB1IPQ7Z5R6 666 aaPredicted RBP9.32□□□□□ -0.92
GM2A-201ENST00000357164 LRRC45Q96CN5 670 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 PACSIN1Q9BY11 444 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 BAIAP2L1Q9UHR4 511 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 EID1Q9Y6B2 187 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 USO1O60763 962 aaKnown RBP9.32□□□□□ -0.92
GM2A-201ENST00000357164 KIF4AO95239 1232 aa9.32□□□□□ -0.92
GM2A-201ENST00000357164 SNRPA1P09661 255 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms