RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 LRRC43Q8N309 656 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 GFM2Q969S9 779 aaKnown RBP19.47■□□□□ 0.71
SMC4-201ENST00000344722 NDE1Q9NXR1 346 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 RIMBP2O15034 1052 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 KCNA6P17658 529 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 PABPC4Q13310 644 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■■■■ 455.6
SMC4-201ENST00000344722 GRAMD4Q6IC98 578 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 SLC17A8Q8NDX2 589 aa19.47■□□□□ 0.71
SMC4-201ENST00000344722 KLC1Q07866 573 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 CRLF3Q8IUI8 442 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 MAP7D3Q8IWC1 876 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 SRRM1Q8IYB3 904 aaKnown RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 RNF34Q969K3 372 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 CCDC127Q96BQ5 260 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 TTC25Q96NG3 672 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 NOC2LQ9Y3T9 749 aaKnown RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 KIF28PB7ZC32 967 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 ZNF185O15231 689 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 C1orf146Q5VVC0 180 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 RFX6Q8HWS3 928 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 C3orf20Q8ND61 904 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 NRBF2Q96F24 287 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 PRPF6O94906 941 aaKnown RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 KRT1P04264 644 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 ACTN1P12814 892 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 CUL3Q13618 768 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 CDC37Q16543 378 aaPredicted RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 PTGISQ16647 500 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 RAD9BQ6WBX8 426 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 FOXN1O15353 648 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 TOM1L1O75674 476 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 KRT19P08727 400 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 SLC20A2Q08357 652 aa19.46■□□□□ 0.71
SMC4-201ENST00000344722 APLFQ8IW19 511 aaPredicted RBP19.46■□□□□ 0.71
SMC4-201ENST00000344722 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 DDB1Q16531 1140 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 UBE2TQ9NPD8 197 aaPredicted RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 PPARGC1AQ9UBK2 798 aaKnown RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 GGA1Q9UJY5 639 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 DHX34Q14147 1143 aaKnown RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 WDR93Q6P2C0 686 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 PYROXD1Q8WU10 500 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 CPP00450 1065 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 DLATP10515 647 aaKnown RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 JADE1Q6IE81 842 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 EIF4E1BA6NMX2 242 aaKnown RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 LIG4P49917 911 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 AGGF1Q8N302 714 aaeCLIP19.45■□□□□ 0.72e-85■■■■■ 286.7
SMC4-201ENST00000344722 STAG2Q8N3U4 1231 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 MMGT1Q8N4V1 131 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 TEKT3Q9BXF9 490 aa19.45■□□□□ 0.7
SMC4-201ENST00000344722 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
SMC4-201ENST00000344722 CLIC2O15247 247 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 CNGA1P29973 690 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 FAM83BQ5T0W9 1011 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 SCYL2Q6P3W7 929 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 MRPL46Q9H2W6 279 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 SAYSD1Q9NPB0 183 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 GYG1P46976 350 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 TBC1D22AQ8WUA7 517 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 HOOK2Q96ED9 719 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 XPO6Q96QU8 1125 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 TRIM56Q9BRZ2 755 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 GREM2Q9H772 168 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 DNAJC17Q9NVM6 304 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 ADD3Q9UEY8 706 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 USP42Q9H9J4 1324 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 PVALEFA0A1B0GWK0 134 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 EEF1DP29692 281 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 CACNB1Q02641 598 aaPredicted RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 SGSM3Q96HU1 749 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 FAM96AQ9H5X1 160 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 CD248Q9HCU0 757 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 MCF2LO15068 1137 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 MRPS35P82673 323 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
SMC4-201ENST00000344722 FUCA2Q9BTY2 467 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SMC4-201ENST00000344722 PLA2G4BP0C869 781 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 FMR1Q06787 632 aaKnown RBP eCLIP19.43■□□□□ 0.73e-7■□□□□ 10
SMC4-201ENST00000344722 CCDC92Q53HC0 331 aaPredicted RBP19.43■□□□□ 0.7
SMC4-201ENST00000344722 ASPRV1Q53RT3 343 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 CSRNP1Q96S65 589 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 USP15Q9Y4E8 981 aaPredicted RBP19.43■□□□□ 0.7
SMC4-201ENST00000344722 NCF2P19878 526 aaPredicted RBP19.43■□□□□ 0.7
SMC4-201ENST00000344722 CYP4A11Q02928 519 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 ART3Q13508 389 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 NOA1Q8NC60 698 aaKnown RBP19.43■□□□□ 0.7
SMC4-201ENST00000344722 ZIM3Q96PE6 472 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 STX1BP61266 288 aa19.43■□□□□ 0.7
SMC4-201ENST00000344722 PDIK1LQ8N165 341 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms