RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 CIITAP33076 1130 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 KCNA1Q09470 495 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 EDRF1Q3B7T1 1238 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 BTNL9Q6UXG8 535 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 FLAD1Q8NFF5 587 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 ACER1Q8TDN7 264 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 VPS18Q9P253 973 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.58■■□□□ 1.37
CCDC38-201ENST00000344280 TARSL2A2RTX5 802 aaKnown RBP23.58■■□□□ 1.36
CCDC38-201ENST00000344280 TCP10L2B9ZVM9 353 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 CETN3O15182 167 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 FOSP01100 380 aaPredicted RBP23.58■■□□□ 1.36
CCDC38-201ENST00000344280 SERPING1P05155 500 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 RAPGEF1Q13905 1077 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 EPM2AIP1Q7L775 607 aaPredicted RBP23.58■■□□□ 1.36
CCDC38-201ENST00000344280 MSL3Q8N5Y2 521 aaKnown RBP23.58■■□□□ 1.36
CCDC38-201ENST00000344280 FAM133AQ8N9E0 248 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 HDAC7Q8WUI4 952 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 FAM20AQ96MK3 541 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 GANQ9H2C0 597 aa23.58■■□□□ 1.36
CCDC38-201ENST00000344280 ENTPD3O75355 529 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 KNOP1Q1ED39 458 aaKnown RBP23.57■■□□□ 1.36
CCDC38-201ENST00000344280 ALS2CR12Q96Q35 445 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 EIF2AK1Q9BQI3 630 aaKnown RBP23.57■■□□□ 1.36
CCDC38-201ENST00000344280 TLR10Q9BXR5 811 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 HDAC9Q9UKV0 1011 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 SFI1A8K8P3 1242 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 KLHDC7AQ5VTJ3 777 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 DPY19L2P1Q6NXN4 242 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 SYN2Q92777 582 aaPredicted RBP23.57■■□□□ 1.36
CCDC38-201ENST00000344280 ZFP91Q96JP5 570 aaPredicted RBP23.57■■□□□ 1.36
CCDC38-201ENST00000344280 WDR18Q9BV38 432 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 IKZF4Q9H2S9 585 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 TRAF3IP3Q9Y228 551 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 FAN1Q9Y2M0 1017 aa23.57■■□□□ 1.36
CCDC38-201ENST00000344280 IGLV3-22A0A075B6J6 115 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 A0A087X0T9 212 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 PHACTR2O75167 634 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 EIF3JO75822 258 aaKnown RBP23.56■■□□□ 1.36
CCDC38-201ENST00000344280 FAM228BP0C875 321 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 SLC9A1P19634 815 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 ZNF76P36508 570 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 PPP4R3CPQ6ZMV5 832 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 PIGOQ8TEQ8 1089 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 CCDC102AQ96A19 550 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCDC38-201ENST00000344280 FAM184BQ9ULE4 1060 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 ZBTB39O15060 712 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 AKAP3O75969 853 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 MATR3P43243 847 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCDC38-201ENST00000344280 UBXN2AP68543 259 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 CC2D2BQ6DHV5 1058 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 ARHGAP27Q6ZUM4 889 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 SPATA4Q8NEY3 305 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 PACSIN1Q9BY11 444 aa23.56■■□□□ 1.36
CCDC38-201ENST00000344280 CFBP00751 764 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 PRLRP16471 622 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 EPS15P42566 896 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 TNNT3P45378 269 aaPredicted RBP23.55■■□□□ 1.36
CCDC38-201ENST00000344280 NAP1L1P55209 391 aaKnown RBP23.55■■□□□ 1.36
CCDC38-201ENST00000344280 GPS2Q13227 327 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 CTTNQ14247 550 aaKnown RBP23.55■■□□□ 1.36
CCDC38-201ENST00000344280 LRRC1Q9BTT6 524 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCDC38-201ENST00000344280 NUCKS1Q9H1E3 243 aaKnown RBP23.55■■□□□ 1.36
CCDC38-201ENST00000344280 ADAMTS1Q9UHI8 967 aa23.55■■□□□ 1.36
CCDC38-201ENST00000344280 HMGB2P26583 209 aaKnown RBP23.54■■□□□ 1.36
CCDC38-201ENST00000344280 KLRC1P26715 233 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CASP4P49662 377 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 STAT2P52630 851 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 MCTP2Q6DN12 878 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 NOX5Q96PH1 765 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 DMGDHQ9UI17 866 aaKnown RBP23.54■■□□□ 1.36
CCDC38-201ENST00000344280 HYOU1Q9Y4L1 999 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 ASTN1O14525 1302 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 PPIP5K2O43314 1243 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CHMP2AO43633 222 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CYP3A4P08684 503 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CCDC174Q6PII3 467 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CCNI2Q6ZMN8 369 aaPredicted RBP23.54■■□□□ 1.36
CCDC38-201ENST00000344280 ZNF572Q7Z3I7 529 aaPredicted RBP23.54■■□□□ 1.36
CCDC38-201ENST00000344280 CDAN1Q8IWY9 1227 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 AIPL1Q9NZN9 384 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 ARMCX3Q9UH62 379 aaPredicted RBP23.54■■□□□ 1.36
CCDC38-201ENST00000344280 RABGAP1Q9Y3P9 1069 aa23.54■■□□□ 1.36
CCDC38-201ENST00000344280 PIK3CDO00329 1044 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 SLC18A3Q16572 532 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 MMGT1Q8N4V1 131 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 MS4A14Q96JA4 679 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 ZC3H4Q9UPT8 1303 aaKnown RBP23.53■■□□□ 1.36
CCDC38-201ENST00000344280 ATAD5Q96QE3 1844 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 CLIC2O15247 247 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 GCNT3O95395 438 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 KLHL30Q0D2K2 578 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 RINT1Q6NUQ1 792 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 DNAAF5Q86Y56 855 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 POLR3CQ9BUI4 534 aaPredicted RBP23.53■■□□□ 1.36
CCDC38-201ENST00000344280 HPCAL4Q9UM19 191 aa23.53■■□□□ 1.36
CCDC38-201ENST00000344280 C21orf2O43822 256 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms