RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 RBM43Q6ZSC3 357 aaKnown RBP10.88□□□□□ -0.67
CLDN18-202ENST00000343735 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
CLDN18-202ENST00000343735 SENP7Q9BQF6 1050 aa10.88□□□□□ -0.67
CLDN18-202ENST00000343735 POLR3CQ9BUI4 534 aaPredicted RBP10.88□□□□□ -0.67
CLDN18-202ENST00000343735 TUFT1Q9NNX1 390 aa10.88□□□□□ -0.67
CLDN18-202ENST00000343735 KIAA1468Q9P260 1216 aa10.88□□□□□ -0.67
CLDN18-202ENST00000343735 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 DKC1O60832 514 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 JAK3P52333 1124 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 CRHR2Q13324 411 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 KIF22Q14807 665 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 EPHA7Q15375 998 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 CAVIN2O95810 425 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 RPA1P27694 616 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 IRF5Q13568 498 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 NEDD9Q14511 834 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 SAMSN1Q9NSI8 373 aaKnown RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 VAV3Q9UKW4 847 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 POTEMA6NI47 508 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 PGK2P07205 417 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
CLDN18-202ENST00000343735 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
CLDN18-202ENST00000343735 FCGRTP55899 365 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 UBASH3AP57075 661 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 SPIRE1Q08AE8 756 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 MIER3Q7Z3K6 550 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 VTA1Q9NP79 307 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
CLDN18-202ENST00000343735 RGS2P41220 211 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 MAP2K5Q13163 448 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 ARHGEF6Q15052 776 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 POSTNQ15063 836 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 E2F4Q16254 413 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 SV2BQ7L1I2 683 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 DHX40Q8IX18 779 aaKnown RBP10.86□□□□□ -0.67
CLDN18-202ENST00000343735 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
CLDN18-202ENST00000343735 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
CLDN18-202ENST00000343735 GTF2F1P35269 517 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLDN18-202ENST00000343735 DNA2P51530 1060 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 DNM3Q9UQ16 869 aa10.86□□□□□ -0.67
CLDN18-202ENST00000343735 SYNGAP1Q96PV0 1343 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 PLCG1P19174 1290 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 TMEM119Q4V9L6 283 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 MORN1Q5T089 497 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 SYT10Q6XYQ8 523 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 EIF2AK1Q9BQI3 630 aaKnown RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 MMTAG2Q9BU76 263 aaKnown RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 CENPFP49454 3210 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 DHX15O43143 795 aaKnown RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 AOC2O75106 756 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 P4HBP07237 508 aaKnown RBP10.85□□□□□ -0.67
CLDN18-202ENST00000343735 HOXC6P09630 235 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 TTLL4Q14679 1199 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 B3GNT9Q6UX72 402 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 SEPT14Q6ZU15 432 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 SMARCE1Q969G3 411 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 PAGE5Q96GU1 130 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 ZNF236Q9UL36 1845 aa10.85□□□□□ -0.67
CLDN18-202ENST00000343735 TFRCP02786 760 aaKnown RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 GRB10Q13322 594 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 IQCB1Q15051 598 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 PDXDC2PQ6P474 469 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 ARMCX2Q7L311 632 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 SH3RF1Q7Z6J0 888 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 KIAA1524Q8TCG1 905 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 SCFD2Q8WU76 684 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 LARP4BQ92615 738 aaKnown RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 NACC1Q96RE7 527 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 VPS16Q9H269 839 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 SLC9A2Q9UBY0 812 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 PSAPP07602 524 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 KCNA2P16389 499 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 FANCCQ00597 558 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 FKBP15Q5T1M5 1219 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 MIS18BP1Q6P0N0 1132 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 RAD54LQ92698 747 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 MAML3Q96JK9 1138 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 GSDMAQ96QA5 445 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 HSD17B14Q9BPX1 270 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
CLDN18-202ENST00000343735 TFR2Q9UP52 801 aa10.84□□□□□ -0.67
CLDN18-202ENST00000343735 NFE2L3Q9Y4A8 694 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms