RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 PSAPP07602 524 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MDM2Q00987 491 aaPredicted RBP14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 FPGSQ05932 587 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SERINC5Q86VE9 423 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 FAM205CA6NFA0 338 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CYP2C9P11712 490 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RFC2P35250 354 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CHMP4BP1P59074 171 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 GUCY1B3Q02153 619 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PPP2R5CQ13362 524 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RPAINQ86UA6 219 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CCDC60Q8IWA6 550 aaPredicted RBP14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 HAS1Q92839 578 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 UBE2OQ9C0C9 1292 aaKnown RBP14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ZNF302Q9NR11 478 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 DISC1Q9NRI5 854 aa14.77□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MBLAC1A4D2B0 266 aaPredicted RBP14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 BAG4O95429 457 aaKnown RBP14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PFKMP08237 780 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 FOSBP53539 338 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 GNL2Q13823 731 aaKnown RBP14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 HIC1Q14526 733 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RETREG2Q8NC44 543 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ATP8B4Q8TF62 1192 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LMBR1Q8WVP7 490 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ATP6V0A1Q93050 837 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 UNC45AQ9H3U1 944 aa14.76□□□□□ -0.05
HLA-DQA1-201ENST00000343139 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 COL1A2P08123 1366 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 POTEB3A0JP26 581 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 BACH1O14867 736 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 HBP1O60381 514 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 NEMFO60524 1076 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PDCP20941 246 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CYP2C18P33260 490 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PPFIA1Q13136 1202 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PLCB4Q15147 1175 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TRIM71Q2Q1W2 868 aaKnown RBP14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SWSAP1Q6NVH7 229 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TAF2Q6P1X5 1199 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PDXDC2PQ6P474 469 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 POTEBQ6S5H4 581 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 DHX38Q92620 1227 aaKnown RBP14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 FAM167AQ96KS9 214 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MTMR9Q96QG7 549 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PPP1R12CQ9BZL4 782 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 WNT8AQ9H1J5 351 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SETD4Q9NVD3 440 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 VAV3Q9UKW4 847 aa14.75□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LTBP2Q14767 1821 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SELPP16109 830 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 GRIK4Q16099 956 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LARP1BQ659C4 914 aaKnown RBP14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RPUSD2Q8IZ73 545 aaKnown RBP14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PPP1R13LQ8WUF5 828 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 NOL7Q9UMY1 257 aaKnown RBP14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SAMM50Q9Y512 469 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 UMODL1Q5DID0 1318 aa14.74□□□□□ -0.05
HLA-DQA1-201ENST00000343139 KIF28PB7ZC32 967 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 H3BQV1 296 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TREHO43280 583 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CKBP12277 381 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 INSRRP14616 1297 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CSF2RAP15509 400 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MARK3P27448 753 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ZNF200P98182 395 aaPredicted RBP14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SPIRE1Q08AE8 756 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CALCRLQ16602 461 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ZNF484Q5JVG2 852 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 HABP4Q5JVS0 413 aaKnown RBP14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MIER3Q7Z3K6 550 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 IL23AQ9NPF7 189 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TRPC6Q9Y210 931 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 MARCH6O60337 910 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 DKC1O60832 514 aaKnown RBP eCLIP14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PDIA4P13667 645 aaKnown RBP14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ATP4AP20648 1035 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LRIT3Q3SXY7 679 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RILPL1Q5EBL4 403 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LRRC8DQ7L1W4 858 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 GJA10Q969M2 543 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 UIMC1Q96RL1 719 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PCDHA12Q9UN75 941 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CEP131Q9UPN4 1083 aa14.73□□□□□ -0.05
HLA-DQA1-201ENST00000343139 WNT7AO00755 349 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CHMP2AO43633 222 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CCL23P55773 120 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 EPHA7Q15375 998 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TTC38Q5R3I4 469 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TRAF7Q6Q0C0 670 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 416.5 ms