RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GABBR1Q9UBS5 961 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 IFNB1P01574 187 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 SRGNP10124 158 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 HOXD10P28358 340 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 ELF2Q15723 593 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 TCP11X2Q5H9J9 407 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 SWSAP1Q6NVH7 229 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 CPLX4Q7Z7G2 160 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 CLEC10AQ8IUN9 316 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 MRRFQ96E11 262 aaKnown RBP21.3■■□□□ 1
SEMA6C-201ENST00000341697 PSMC5P62195 406 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 ATP2C2O75185 946 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 ZBED6P86452 979 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 GRK7Q8WTQ7 553 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 HAUS1Q96CS2 278 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 DEFB129Q9H1M3 183 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 TGFB2P61812 414 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 ATP2C1P98194 919 aaPredicted RBP21.29■■□□□ 1
SEMA6C-201ENST00000341697 MAPK6Q16659 721 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 PTPROQ16827 1216 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 CEP55Q53EZ4 464 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 CASC4Q6P4E1 433 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 KIF28PB7ZC32 967 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 CAPN2P17655 700 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 INTS8Q75QN2 995 aaKnown RBP21.29■■□□□ 1
SEMA6C-201ENST00000341697 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
SEMA6C-201ENST00000341697 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.28■■□□□ 1
SEMA6C-201ENST00000341697 PPANQ9NQ55 473 aaKnown RBP21.28■■□□□ 1
SEMA6C-201ENST00000341697 NRBP1Q9UHY1 535 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 MXRA7P84157 204 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 NBPF11Q86T75 865 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 FMR1NBQ8N0W7 255 aaPredicted RBP21.28■■□□□ 1
SEMA6C-201ENST00000341697 RGL2O15211 777 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 MED7O43513 233 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 NFX1Q12986 1120 aaKnown RBP21.28■■□□□ 1
SEMA6C-201ENST00000341697 SAMD7Q7Z3H4 446 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 PHKA2P46019 1235 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 PPP2R5DQ14738 602 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 FAM133AQ8N9E0 248 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 PSPC1Q8WXF1 523 aaKnown RBP21.28■■□□□ 1
SEMA6C-201ENST00000341697 POTEFA5A3E0 1075 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 GFPT2O94808 682 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 POTEIP0CG38 1075 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 GABPAQ06546 454 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 POTEGQ6S5H5 508 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 POTEEQ6S8J3 1075 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 MAP7D3Q8IWC1 876 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 MTRQ99707 1265 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 ANAPC4Q9UJX5 808 aa21.28■■□□□ 1
SEMA6C-201ENST00000341697 PDHBP11177 359 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 ANTXR2P58335 489 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 MTMR3Q13615 1198 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 TKFCQ3LXA3 575 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 VSTM4Q8IW00 320 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 ZNF653Q96CK0 615 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 KIAA1586Q9HCI6 787 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 SNAPC2Q13487 334 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 RUFY4Q6ZNE9 571 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 THNSL1Q8IYQ7 743 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 LXNQ9BS40 222 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 GOLPH3LQ9H4A5 285 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 CLDN3O15551 220 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 MESDQ14696 234 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 KRT31Q15323 416 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 LGSNQ5TDP6 509 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 PROM2Q8N271 834 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 SPATA33Q96N06 139 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 PHF20Q9BVI0 1012 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 TRIM7Q9C029 511 aa21.27■■□□□ 1
SEMA6C-201ENST00000341697 COASYQ13057 564 aa21.27■□□□□ 0.99
SEMA6C-201ENST00000341697 MFSD14CQ5VZR4 134 aa21.27■□□□□ 0.99
SEMA6C-201ENST00000341697 KCNV1Q6PIU1 500 aa21.27■□□□□ 0.99
SEMA6C-201ENST00000341697 KIF2CQ99661 725 aa21.27■□□□□ 0.99
SEMA6C-201ENST00000341697 PRR12Q9ULL5 1215 aa21.27■□□□□ 0.99
SEMA6C-201ENST00000341697 CTNND1O60716 968 aaKnown RBP21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 PTPN21Q16825 1174 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 SEL1LQ9UBV2 794 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 SARNPP82979 210 aaKnown RBP21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 GOLGA8FQ08AF8 430 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 GOLGA8DPQ0D2H9 430 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 EPHA7Q15375 998 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 TAOK1Q7L7X3 1001 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 MYRIPQ8NFW9 859 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 FAM149B1Q96BN6 582 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 EIF2AK1Q9BQI3 630 aaKnown RBP21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 PCDHA10Q9Y5I2 948 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 PDS5AQ29RF7 1337 aaKnown RBP21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 U2AF2P26368 475 aaKnown RBP eCLIP21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 CASP1P29466 404 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 KIF11P52732 1056 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 EHHADHQ08426 723 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 CFAP157Q5JU67 520 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 IFT122Q9HBG6 1241 aa21.26■□□□□ 0.99
SEMA6C-201ENST00000341697 GOLGA6CA6NDK9 693 aa21.25■□□□□ 0.99
SEMA6C-201ENST00000341697 GOLGA6BA6NDN3 693 aa21.25■□□□□ 0.99
SEMA6C-201ENST00000341697 A6NJR5 290 aa21.25■□□□□ 0.99
SEMA6C-201ENST00000341697 GOLGA6DP0CG33 693 aa21.25■□□□□ 0.99
SEMA6C-201ENST00000341697 FGFR2P21802 821 aa21.25■□□□□ 0.99
SEMA6C-201ENST00000341697 KIAA1841Q6NSI8 718 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms