RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 DUSP28Q4G0W2 176 aa23.08■■□□□ 1.29
CLDND1-201ENST00000341181 ABHD15Q6UXT9 468 aa23.08■■□□□ 1.29
CLDND1-201ENST00000341181 DHX37Q8IY37 1157 aaKnown RBP23.08■■□□□ 1.29
CLDND1-201ENST00000341181 SMAP1Q8IYB5 467 aaPredicted RBP23.08■■□□□ 1.29
CLDND1-201ENST00000341181 RAET1EQ8TD07 263 aa23.08■■□□□ 1.29
CLDND1-201ENST00000341181 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.29
CLDND1-201ENST00000341181 POLR3CQ9BUI4 534 aaPredicted RBP23.08■■□□□ 1.29
CLDND1-201ENST00000341181 PCDHA10Q9Y5I2 948 aa23.08■■□□□ 1.29
CLDND1-201ENST00000341181 KDM3AQ9Y4C1 1321 aa23.08■■□□□ 1.28
CLDND1-201ENST00000341181 E9PMD0 336 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 ADCY3O60266 1144 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 SLFN14P0C7P3 912 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 CASP1P29466 404 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 SFNP31947 248 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 CACNB2Q08289 660 aaPredicted RBP23.07■■□□□ 1.28
CLDND1-201ENST00000341181 GIMAP8Q8ND71 665 aaPredicted RBP23.07■■□□□ 1.28
CLDND1-201ENST00000341181 SPATA33Q96N06 139 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 GSTTP1A0A1W2PQM5 241 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 GNRH1P01148 92 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
CLDND1-201ENST00000341181 RNF214Q8ND24 703 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 WDR81Q562E7 1941 aa23.07■■□□□ 1.28
CLDND1-201ENST00000341181 PRR29P0C7W0 189 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 IRX5P78411 483 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 MFSD14CQ5VZR4 134 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 CKAP2LQ8IYA6 745 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 PIGOQ8TEQ8 1089 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TIGD1Q96MW7 591 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 GPR20Q99678 358 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 PTCH2Q9Y6C5 1203 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 MKI67P46013 3256 aaKnown RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TMEM150BA6NC51 233 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 SUPT20HL2P0C7V6 817 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 PRKAR2AP13861 404 aaKnown RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 AFMP43652 599 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 PNOCQ13519 176 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 DHX8Q14562 1220 aaKnown RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 SWSAP1Q6NVH7 229 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TRIM50Q86XT4 487 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 PCYT2Q99447 389 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 NT5C3AQ9H0P0 336 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TNMDQ9H2S6 317 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 TUFT1Q9NNX1 390 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 GABBR1Q9UBS5 961 aa23.06■■□□□ 1.28
CLDND1-201ENST00000341181 GNEQ9Y223 722 aaKnown RBP23.06■■□□□ 1.28
CLDND1-201ENST00000341181 ZNF862O60290 1169 aa23.05■■□□□ 1.28
CLDND1-201ENST00000341181 ATG7O95352 703 aa23.05■■□□□ 1.28
CLDND1-201ENST00000341181 TCF7P36402 384 aaPredicted RBP23.05■■□□□ 1.28
CLDND1-201ENST00000341181 IQSEC1Q6DN90 963 aa23.05■■□□□ 1.28
CLDND1-201ENST00000341181 CEP57L1Q8IYX8 460 aa23.05■■□□□ 1.28
CLDND1-201ENST00000341181 PAGE5Q96GU1 130 aa23.05■■□□□ 1.28
CLDND1-201ENST00000341181 NOP56O00567 594 aaKnown RBP23.04■■□□□ 1.28
CLDND1-201ENST00000341181 GH1P01241 217 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 MCM6Q14566 821 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 RDM1Q8NG50 284 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 LARP4BQ92615 738 aaKnown RBP23.04■■□□□ 1.28
CLDND1-201ENST00000341181 RAD54LQ92698 747 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 HMGCRP04035 888 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 PSAPP07602 524 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 CCND3P30281 292 aaPredicted RBP23.04■■□□□ 1.28
CLDND1-201ENST00000341181 QARSP47897 775 aaKnown RBP23.04■■□□□ 1.28
CLDND1-201ENST00000341181 MDM2Q00987 491 aaPredicted RBP23.04■■□□□ 1.28
CLDND1-201ENST00000341181 SH3RF1Q7Z6J0 888 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 SH2D3AQ9BRG2 576 aa23.04■■□□□ 1.28
CLDND1-201ENST00000341181 BACH1O14867 736 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 MIS18BP1Q6P0N0 1132 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 NEK9Q8TD19 979 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 EMID1Q96A84 441 aaPredicted RBP23.03■■□□□ 1.28
CLDND1-201ENST00000341181 KBTBD4Q9NVX7 518 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 STK17AQ9UEE5 414 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 IGSF9BQ9UPX0 1349 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 IGKV6D-21A0A0A0MT36 114 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 TLK2Q86UE8 772 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 OR6J1Q8NGC5 347 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 SEPT1Q8WYJ6 367 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 PYM1Q9BRP8 204 aaKnown RBP23.03■■□□□ 1.28
CLDND1-201ENST00000341181 BLZF1Q9H2G9 400 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 ZSWIM4Q9H7M6 989 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 STK24Q9Y6E0 443 aa23.03■■□□□ 1.28
CLDND1-201ENST00000341181 LAMC2Q13753 1193 aa23.02■■□□□ 1.28
CLDND1-201ENST00000341181 POSTNQ15063 836 aa23.02■■□□□ 1.28
CLDND1-201ENST00000341181 TRMT44Q8IYL2 757 aaKnown RBP23.02■■□□□ 1.28
CLDND1-201ENST00000341181 PPTC7Q8NI37 304 aa23.02■■□□□ 1.28
CLDND1-201ENST00000341181 BHMT2Q9H2M3 363 aa23.02■■□□□ 1.28
CLDND1-201ENST00000341181 HSPA8P11142 646 aaKnown RBP23.01■■□□□ 1.27
CLDND1-201ENST00000341181 AKR1A1P14550 325 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 ATP4AP20648 1035 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 CNGA1P29973 690 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 PSMC5P62195 406 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 ARHGEF6Q15052 776 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 UTP14CQ5TAP6 766 aaKnown RBP23.01■■□□□ 1.27
CLDND1-201ENST00000341181 MAP3K21Q5TCX8 1036 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 PXYLP1Q8TE99 480 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 USP25Q9UHP3 1055 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 FAM184BQ9ULE4 1060 aa23.01■■□□□ 1.27
CLDND1-201ENST00000341181 DYNC1LI2O43237 492 aaPredicted RBP23.01■■□□□ 1.27
CLDND1-201ENST00000341181 SLC26A4O43511 780 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms