RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PLVAPQ9BX97 442 aa13.57□□□□□ -0.24
ATXN3-201ENST00000340660 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
ATXN3-201ENST00000340660 FBXL21Q9UKT6 434 aa13.57□□□□□ -0.24
ATXN3-201ENST00000340660 CHMP4BP1P59074 171 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
ATXN3-201ENST00000340660 ANKRD54Q6NXT1 300 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 KIAA1211Q6ZU35 1233 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 DDX1Q92499 740 aaKnown RBP13.56□□□□□ -0.24
ATXN3-201ENST00000340660 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 RC3H2Q9HBD1 1191 aaKnown RBP13.56□□□□□ -0.24
ATXN3-201ENST00000340660 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
ATXN3-201ENST00000340660 KRBA1A5PL33 1030 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 ASB14A6NK59 587 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 KCNC3Q14003 757 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 MEIOBQ8N635 442 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
ATXN3-201ENST00000340660 OCSTAMPQ9BR26 566 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 ARHGAP9Q9BRR9 750 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 ADGRA3Q8IWK6 1321 aa13.55□□□□□ -0.24
ATXN3-201ENST00000340660 MYH1P12882 1939 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
ATXN3-201ENST00000340660 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
ATXN3-201ENST00000340660 TECP42680 631 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 PLCD1P51178 756 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
ATXN3-201ENST00000340660 CALD1Q05682 793 aaKnown RBP13.54□□□□□ -0.24
ATXN3-201ENST00000340660 CCDC6Q16204 474 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 DUSP6Q16828 381 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
ATXN3-201ENST00000340660 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 GATA6Q92908 595 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 P2RX5Q93086 422 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 BORCS6Q96GS4 357 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 SRCIN1Q9C0H9 1055 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 DUSP12Q9UNI6 340 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
ATXN3-201ENST00000340660 ATP2A1O14983 1001 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 TIMM10P62072 90 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 GABPAQ06546 454 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 SPATA5Q8NB90 893 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
ATXN3-201ENST00000340660 ADAMTS20P59510 1910 aa13.52□□□□□ -0.24
ATXN3-201ENST00000340660 GLULP15104 373 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 SPINK2P20155 84 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 ZNF528Q3MIS6 628 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
ATXN3-201ENST00000340660 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 TBC1D17Q9HA65 648 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 RAVER2Q9HCJ3 691 aaKnown RBP13.52□□□□□ -0.25
ATXN3-201ENST00000340660 VTA1Q9NP79 307 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 LRP2BPQ9P2M1 347 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 GMEB2Q9UKD1 530 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 PCDHGA2Q9Y5H1 932 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 EMSYQ7Z589 1322 aa13.52□□□□□ -0.25
ATXN3-201ENST00000340660 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 USP17L21D6R901 530 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 TM4SF5O14894 197 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 LILRB5O75023 590 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 MMP3P08254 477 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 RFC5P40937 340 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 ICA1Q05084 483 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 TDGQ13569 410 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 LINC00528Q8N1L1 170 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 ZBTB44Q8NCP5 570 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 FBXO40Q9UH90 709 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 KALRNO60229 2985 aa13.51□□□□□ -0.25
ATXN3-201ENST00000340660 IL16Q14005 1332 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 A6NJR5 290 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 H3BM21 787 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 NARSO43776 548 aaKnown RBP13.5□□□□□ -0.25
ATXN3-201ENST00000340660 KPNA6O60684 536 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 CIAO1O76071 339 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 PTK7Q13308 1070 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 TTC6Q86TZ1 520 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms