RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 ZNF302Q9NR11 478 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 SETD4Q9NVD3 440 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PCDHA10Q9Y5I2 948 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 MSH4O15457 936 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 DHX15O43143 795 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 BAG4O95429 457 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 TDP2O95551 362 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 FGBP02675 491 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 RPLP2P05387 115 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 ACTN1P12814 892 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 SELPP16109 830 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 SFNP31947 248 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 JAK3P52333 1124 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 NR5A1Q13285 461 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 SHHQ15465 462 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 ABHD15Q6UXT9 468 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 CKAP2LQ8IYA6 745 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 LENG9Q96B70 501 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 RNPC3Q96LT9 517 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 MBOAT7Q96N66 472 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 UIMC1Q96RL1 719 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.8□□□□□ -0.36
SLC28A1-202ENST00000338602 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 DOCK5Q9H7D0 1870 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 BTBD18B2RXH4 712 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 CAND2O75155 1236 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 CCNE2O96020 404 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 ZNF200P98182 395 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 GUCY1B3Q02153 619 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 RBL2Q08999 1139 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 GRIK4Q16099 956 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 SWSAP1Q6NVH7 229 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 TAF2Q6P1X5 1199 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 SERINC5Q86VE9 423 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 SCLYQ96I15 445 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 FAM20AQ96MK3 541 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 FTOQ9C0B1 505 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 WNT8AQ9H1J5 351 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 DISC1Q9NRI5 854 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
SLC28A1-202ENST00000338602 IGKV6D-21A0A0A0MT36 114 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 TBX3O15119 743 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 TREHO43280 583 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 HBP1O60381 514 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 ACRP10323 421 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 CKBP12277 381 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 HOXC8P31273 242 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 THPOP40225 353 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 EPHB4P54760 987 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 TMEM240Q5SV17 173 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 ZNF365Q70YC5 407 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 MIER3Q7Z3K6 550 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 DEFB128Q7Z7B8 93 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 ATP8B4Q8TF62 1192 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 LMBR1Q8WVP7 490 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 FAM167AQ96KS9 214 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 PCYT2Q99447 389 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 27.7
SLC28A1-202ENST00000338602 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 TUBE1Q9UJT0 475 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
SLC28A1-202ENST00000338602 CHMP2AO43633 222 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 EDIL3O43854 480 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 PSMD10O75832 226 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 INSRRP14616 1297 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 IGBP1P78318 339 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 Q7L0L9 218 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 CCDC60Q8IWA6 550 aaPredicted RBP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 ETNPPLQ8TBG4 499 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 CTAGE1Q96RT6 745 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 NRBP2Q9NSY0 501 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 GABBR1Q9UBS5 961 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-202ENST00000338602 COL1A2P08123 1366 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 H3BQV1 296 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 SLC37A4O43826 429 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms