RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 DPY19L2P1Q6NXN4 242 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 FOXR2Q6PJQ5 311 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 CCDC17Q96LX7 622 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 MBOAT7Q96N66 472 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 EDEM3Q9BZQ6 932 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 EHD4Q9H223 541 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 GANQ9H2C0 597 aa14.78□□□□□ -0.04
TUBA1B-201ENST00000332858 SFI1A8K8P3 1242 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 OPLAHO14841 1288 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 MARSP56192 900 aaKnown RBP14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 PTPROQ16827 1216 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 CCDC181Q5TID7 509 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.04
TUBA1B-201ENST00000332858 ICA1Q05084 483 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 RGL1Q9NZL6 768 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 FAM184BQ9ULE4 1060 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 ESYT3A0FGR9 886 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 SLC18A3Q16572 532 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 KIAA0753Q2KHM9 967 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 SLC27A3Q5K4L6 730 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 TSEN2Q8NCE0 465 aaKnown RBP14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 ACBD3Q9H3P7 528 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 NYAP2Q9P242 653 aa14.77□□□□□ -0.05
TUBA1B-201ENST00000332858 QSER1Q2KHR3 1735 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 TULP2O00295 520 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 EML1O00423 815 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 ZBTB39O15060 712 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 NDUFB10O96000 172 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 GLI1P08151 1106 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 NPR1P16066 1061 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 CASP4P49662 377 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 PTK2Q05397 1052 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 KLHL30Q0D2K2 578 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 IKQ13123 557 aaPredicted RBP14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 TRADDQ15628 312 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 IQCEQ6IPM2 695 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 LRRC31Q6UY01 552 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 PI4KBQ9UBF8 816 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 AJAP1Q9UKB5 411 aaPredicted RBP14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 MSH4O15457 936 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 AKAP3O75969 853 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 NAB2Q15742 525 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 SKIDA1Q1XH10 827 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 ZC3H3Q8IXZ2 948 aaKnown RBP14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 HDAC9Q9UKV0 1011 aa14.76□□□□□ -0.05
TUBA1B-201ENST00000332858 A0A1W2PRG0 241 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 FAM170AA1A519 330 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 CETN3O15182 167 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 ITIH3Q06033 890 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 SLFN12Q8IYM2 578 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 RNF10Q8N5U6 811 aaKnown RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 ZNF622Q969S3 477 aaKnown RBP eCLIP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 AMNQ9BXJ7 453 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 STIM2Q9P246 746 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 CLIC2O15247 247 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 GNA14O95837 355 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 TATDN1Q6P1N9 297 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 ZNF571Q7Z3V5 609 aaPredicted RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 IRF2BP2Q7Z5L9 587 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 SYT2Q8N9I0 419 aaPredicted RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 RBM46Q8TBY0 533 aaKnown RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 AFAP1L1Q8TED9 768 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 AIPL1Q9NZN9 384 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 DNM3Q9UQ16 869 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 SPATA31A6Q5VVP1 1343 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 RPA1P27694 616 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 EPS15P42566 896 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 KNOP1Q1ED39 458 aaKnown RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 GJB7Q6PEY0 223 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 LEKR1Q6ZMV7 388 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 PIGOQ8TEQ8 1089 aa14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 TDRD3Q9H7E2 651 aaKnown RBP14.75□□□□□ -0.05
TUBA1B-201ENST00000332858 PITPNM2Q9BZ72 1349 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 TRIM66O15016 1216 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 PAFAH1B1P43034 410 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 EDRF1Q3B7T1 1238 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 DCAF17Q5H9S7 520 aaPredicted RBP14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 EPM2AIP1Q7L775 607 aaPredicted RBP14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 FBXO11Q86XK2 927 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 NRXN2Q9P2S2 1712 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 GRID2IPA4D2P6 1211 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 GH2P01242 217 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 FAM153BP0C7A2 387 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 UCHL3P15374 230 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 PON1P27169 355 aa14.74□□□□□ -0.05
TUBA1B-201ENST00000332858 CARSP49589 748 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms