RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLMAPQ14BN4 828 aa19.83■□□□□ 0.77
PKP3-201ENST00000331563 FAM133BQ5BKY9 247 aaKnown RBP19.83■□□□□ 0.77
PKP3-201ENST00000331563 RNF10Q8N5U6 811 aaKnown RBP19.83■□□□□ 0.77
PKP3-201ENST00000331563 CHMP6Q96FZ7 201 aa19.83■□□□□ 0.77
PKP3-201ENST00000331563 PPIP5K2O43314 1243 aa19.83■□□□□ 0.76
PKP3-201ENST00000331563 RHOBTB3O94955 611 aa19.83■□□□□ 0.76
PKP3-201ENST00000331563 GHRP10912 638 aa19.83■□□□□ 0.76
PKP3-201ENST00000331563 ENOX2Q16206 610 aaKnown RBP19.83■□□□□ 0.76
PKP3-201ENST00000331563 UAP1Q16222 522 aaPredicted RBP19.83■□□□□ 0.76
PKP3-201ENST00000331563 ISCUQ9H1K1 167 aa19.83■□□□□ 0.76
PKP3-201ENST00000331563 FBXL5Q9UKA1 691 aa19.83■□□□□ 0.76
PKP3-201ENST00000331563 C5orf60A6NFR6 353 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 NMT2O60551 498 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 PYGLP06737 847 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 GNAT2P19087 354 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 IFIT1BQ5T764 474 aaKnown RBP19.82■□□□□ 0.76
PKP3-201ENST00000331563 CRELD2Q6UXH1 353 aaPredicted RBP19.82■□□□□ 0.76
PKP3-201ENST00000331563 KLRC4O43908 158 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 ORC4O43929 436 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 NEFHP12036 1026 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 HNRNPH3P31942 346 aaKnown RBP19.82■□□□□ 0.76
PKP3-201ENST00000331563 ASIC1P78348 528 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 DTHD1Q6ZMT9 781 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 TANGO6Q9C0B7 1094 aa19.82■□□□□ 0.76
PKP3-201ENST00000331563 KCNK3O14649 394 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 DRD4P21917 467 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 ESR2Q92731 530 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 TNFRSF25Q93038 417 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.81■□□□□ 0.76
PKP3-201ENST00000331563 NDST4Q9H3R1 872 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 PCDHGC5Q9Y5F6 944 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 CACNA1SQ13698 1873 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 GRID2IPA4D2P6 1211 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 H0YGN5 161 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 PJA2O43164 708 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 LCA5LO95447 670 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 VWA3BQ502W6 1294 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 NAALADL2Q58DX5 795 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 FAM47AQ5JRC9 791 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 IQCDQ96DY2 449 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 LUC7LQ9NQ29 371 aaKnown RBP19.81■□□□□ 0.76
PKP3-201ENST00000331563 CHCHD3Q9NX63 227 aaKnown RBP19.81■□□□□ 0.76
PKP3-201ENST00000331563 NOP53Q9NZM5 478 aaKnown RBP19.81■□□□□ 0.76
PKP3-201ENST00000331563 NFS1Q9Y697 457 aa19.81■□□□□ 0.76
PKP3-201ENST00000331563 A0A1B0GUL6 1792 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 DIAPH2O60879 1101 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 UFL1O94874 794 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 RCAN1P53805 252 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 STK4Q13043 487 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 PTPROQ16827 1216 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 DZIP1Q86YF9 867 aaKnown RBP19.8■□□□□ 0.76
PKP3-201ENST00000331563 MFN1Q8IWA4 741 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.8■□□□□ 0.761e-7■□□□□ 9
PKP3-201ENST00000331563 MYH2Q9UKX2 1941 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 PAPOLAP51003 745 aaKnown RBP19.8■□□□□ 0.76
PKP3-201ENST00000331563 CUL1Q13616 776 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 LAMB3Q13751 1172 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 CWF19L1Q69YN2 538 aaKnown RBP19.8■□□□□ 0.76
PKP3-201ENST00000331563 CCDC84Q86UT8 332 aaPredicted RBP19.8■□□□□ 0.76
PKP3-201ENST00000331563 ZSCAN29Q8IWY8 852 aaPredicted RBP19.8■□□□□ 0.76
PKP3-201ENST00000331563 USP38Q8NB14 1042 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 PSMD1Q99460 953 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 SELENOSQ9BQE4 189 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 APBA3O96018 575 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 FCER1AP12319 257 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 ARID5AQ03989 594 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 NPY5RQ15761 445 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 AP1M1Q9BXS5 423 aa19.8■□□□□ 0.76
PKP3-201ENST00000331563 CEP104O60308 925 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 TRAPPC10P48553 1259 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 MTMR3Q13615 1198 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 AGBL2Q5U5Z8 902 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 ARL6IP4Q66PJ3 421 aaKnown RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 AGAP11Q8TF27 550 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 EZH1Q92800 747 aaPredicted RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 HPS3Q969F9 1004 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 XPO6Q96QU8 1125 aaKnown RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 F8W031 263 aaPredicted RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 LIN7AO14910 233 aaPredicted RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 USP17L8P0C7I0 530 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 ENAHQ8N8S7 591 aaPredicted RBP19.79■□□□□ 0.76
PKP3-201ENST00000331563 CCHCR1Q8TD31 782 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 PANK4Q9NVE7 773 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 SAMD15Q9P1V8 674 aa19.79■□□□□ 0.76
PKP3-201ENST00000331563 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 SLC9C1Q4G0N8 1177 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.78■□□□□ 0.76
PKP3-201ENST00000331563 ZNF570Q96NI8 536 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 INPP4AQ96PE3 977 aaPredicted RBP19.78■□□□□ 0.76
PKP3-201ENST00000331563 DCP1AQ9NPI6 582 aaPredicted RBP19.78■□□□□ 0.76
PKP3-201ENST00000331563 SIK3Q9Y2K2 1263 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 CHD4Q14839 1912 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 PPFIA2O75334 1257 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 PAEPP09466 180 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 KLRC1P26715 233 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 FLT3P36888 993 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 KIAA0753Q2KHM9 967 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 STAG2Q8N3U4 1231 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms