RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SLC9C1Q4G0N8 1177 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 STAG2Q8N3U4 1231 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 NEUROG2Q9H2A3 272 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 NOD2Q9HC29 1040 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 CD209Q9NNX6 404 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 FBXL5Q9UKA1 691 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 TLR2O60603 784 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 NAA25Q14CX7 972 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 CPLX4Q7Z7G2 160 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 SLC24A3Q9HC58 644 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 SH3GLB2Q9NR46 395 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 LRRC37AA6NMS7 1700 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 DCDC2CA8MYV0 355 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 LAD1O00515 517 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 SERPING1P05155 500 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 RPSAP08865 295 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 PCP11498 1178 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 SLC8A3P57103 927 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 MAGOHP61326 146 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 MTMR3Q13615 1198 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 ACCSLQ4AC99 568 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 ILDR2Q71H61 639 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 KIRREL3Q8IZU9 778 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 UBLCP1Q8WVY7 318 aaPredicted RBP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 TAF4BQ92750 862 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 MAGOHBQ96A72 148 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 TCP11L1Q9NUJ3 509 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 PCDHA6Q9UN73 950 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 PCDHA8Q9Y5H6 950 aa19.82■□□□□ 0.76
CLSTN3-202ENST00000331148 BHMG1C9JSJ3 638 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 CES2O00748 559 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 PPIP5K2O43314 1243 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 IL1R1P14778 569 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 SFMBT2Q5VUG0 894 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 CUL5Q93034 780 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 MAST2Q6P0Q8 1798 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 F8W031 263 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 FGFR1OPO95684 399 aaKnown RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 DYNLL1P63167 89 aaKnown RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 DZIP1Q86YF9 867 aaKnown RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 HOOK2Q96ED9 719 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 AK8Q96MA6 479 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 TMX4Q9H1E5 349 aaPredicted RBP19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 CCDC88AQ3V6T2 1871 aa19.81■□□□□ 0.76
CLSTN3-202ENST00000331148 BAZ2BQ9UIF8 2168 aaKnown RBP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 LDHBP07195 334 aaKnown RBP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 AMPD3Q01432 767 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 KCNMA1Q12791 1236 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 HIBCHQ6NVY1 386 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 ARHGAP27Q6ZUM4 889 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 MAB21L3Q8N8X9 362 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 SCFD2Q8WU76 684 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 SYN2Q92777 582 aaPredicted RBP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 TBC1D31Q96DN5 1066 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 RSRC1Q96IZ7 334 aaKnown RBP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.8■□□□□ 0.769e-11■■□□□ 12.7
CLSTN3-202ENST00000331148 CEP72Q9P209 647 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 SWAP70Q9UH65 585 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 BAIAP2L1Q9UHR4 511 aa19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLSTN3-202ENST00000331148 H0YIN7 160 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 KCNK3O14649 394 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 FLT3P36888 993 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 RCSD1Q6JBY9 416 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 LRRC55Q6ZSA7 311 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 CHMP6Q96FZ7 201 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 PACSIN1Q9BY11 444 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 NUCKS1Q9H1E3 243 aaKnown RBP19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 CCT8L1PA6NM43 557 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 BUB1BO60566 1050 aaPredicted RBP19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 RPS6KA1Q15418 735 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 PPP1R7Q15435 360 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 SLC18A3Q16572 532 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 KIAA0753Q2KHM9 967 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 FAM47AQ5JRC9 791 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 TBC1D5Q92609 795 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 UPF1Q92900 1129 aaKnown RBP eCLIP19.79■□□□□ 0.764e-13■■■■■ 51.6
CLSTN3-202ENST00000331148 PSMD1Q99460 953 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 COL11A2P13942 1736 aaPredicted RBP19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 LTBP1Q14766 1721 aa19.79■□□□□ 0.76
CLSTN3-202ENST00000331148 SOCS7O14512 581 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 KIF5BP33176 963 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 KRT71Q3SY84 523 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 NAIF1Q69YI7 327 aaPredicted RBP19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 CCDC197Q8NCU1 140 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 STAMBPL1Q96FJ0 436 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 XPO6Q96QU8 1125 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 TANGO6Q9C0B7 1094 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 CNOT10Q9H9A5 744 aaKnown RBP19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 EBF2Q9HAK2 575 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 KIF3CO14782 793 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 NOL4O94818 638 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 OR52Z1P0C646 297 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 IRX1P78414 480 aaPredicted RBP19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 EVX2Q03828 476 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 FAM83BQ5T0W9 1011 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 TMC3Q7Z5M5 1100 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms