RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CCDC6Q16204 474 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 TCP11X2Q5H9J9 407 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 RASA3Q14644 834 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 FCER1AP12319 257 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 TGFB2P61812 414 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 ENOSF1Q7L5Y1 443 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 MSTO1Q9BUK6 570 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 BHMT2Q9H2M3 363 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF302Q9NR11 478 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 GCNT4Q9P109 453 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 GIPC1O14908 333 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 MAFGO15525 162 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ELOA2Q8IYF1 753 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 PPP2R3BQ9Y5P8 575 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 SLC25A27O95847 323 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ABCB4P21439 1286 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 STAT3P40763 770 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 MMP19Q99542 508 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 CDC23Q9UJX2 597 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ZBTB7AO95365 584 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 NAALADL2Q58DX5 795 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 GUF1Q8N442 669 aaKnown RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 CEP72Q9P209 647 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 I3L4J1 428 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 AKR1B1P15121 316 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 BFSP1Q12934 665 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 MFSD14CQ5VZR4 134 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 C11orf57Q6ZUT1 292 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 COG2Q14746 738 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
COL4A5-201ENST00000328300 UBE4BO95155 1302 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 SALL1Q9NSC2 1324 aa12.38□□□□□ -0.43
COL4A5-201ENST00000328300 KRT10P13645 584 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 ANXA13P27216 316 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 EFNA5P52803 228 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 SLC12A2P55011 1212 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 HHATQ5VTY9 493 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 XXYLT1Q8NBI6 393 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 MTRQ99707 1265 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 CCSER1Q9C0I3 900 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 TBXAS1P24557 533 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■□□ 15.2
COL4A5-201ENST00000328300 RABGGTAQ92696 567 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 PFASO15067 1338 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 CTNND1O60716 968 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 GMNNO75496 209 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 CRCPO75575 148 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 OATP04181 439 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 RNF169Q8NCN4 708 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 ATF2P15336 505 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 GABPB1Q06547 395 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 MAPK6Q16659 721 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 BZW1Q7L1Q6 419 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 EPSTI1Q96J88 318 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 RBL2Q08999 1139 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 SCARF1Q14162 830 aa12.37□□□□□ -0.43
COL4A5-201ENST00000328300 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
COL4A5-201ENST00000328300 EYA4O95677 639 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 CDC27P30260 824 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 PNMA8AQ86V59 439 aaPredicted RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 SPP2Q13103 211 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 ARHGAP24Q8N264 748 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 GARSP41250 739 aaKnown RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 CDC42EP5Q6NZY7 148 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 SPATS2Q86XZ4 545 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms