RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CASP1P29466 404 aa17.68■□□□□ 0.42
SMAD3-201ENST00000327367 MRPL28Q13084 256 aaKnown RBP17.68■□□□□ 0.42
SMAD3-201ENST00000327367 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
SMAD3-201ENST00000327367 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
SMAD3-201ENST00000327367 ZBED4O75132 1171 aa17.68■□□□□ 0.42
SMAD3-201ENST00000327367 PYGBP11216 843 aa17.68■□□□□ 0.42
SMAD3-201ENST00000327367 HACD3Q9P035 362 aa17.68■□□□□ 0.42
SMAD3-201ENST00000327367 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
SMAD3-201ENST00000327367 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 POLA2Q14181 598 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 CDO1Q16878 200 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 PARD3BQ8TEW8 1205 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMAD3-201ENST00000327367 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 PDE8AO60658 829 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 ZBED6P86452 979 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 SLFN12Q8IYM2 578 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-201ENST00000327367 CTIFO43310 598 aaKnown RBP17.67■□□□□ 0.42
SMAD3-201ENST00000327367 SCP2P22307 547 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 IGBP1P78318 339 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-201ENST00000327367 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 ADNPQ9H2P0 1102 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 SLC38A10Q9HBR0 1119 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 CUL3Q13618 768 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 WDR75Q8IWA0 830 aaKnown RBP17.67■□□□□ 0.42
SMAD3-201ENST00000327367 RNF14Q9UBS8 474 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 ATP11BQ9Y2G3 1177 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 KRT8P05787 483 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 SRGAP2BP0DMP2 458 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 ARFIP2P53365 341 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 PAGR1Q9BTK6 254 aa17.67■□□□□ 0.42
SMAD3-201ENST00000327367 E9PMD0 336 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 CD58P19256 250 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 GCKRQ14397 625 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ENO1P06733 434 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ALDH18A1P54886 795 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 TRIM60Q495X7 471 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ZNF473Q8WTR7 871 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 M0R2C6 588 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 KRT4P19013 534 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SERPINB3P29508 390 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SZRD1Q7Z422 152 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 HDAC4P56524 1084 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SPOUT1Q5T280 376 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 DNAJC24Q6P3W2 148 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 KIF2BQ8N4N8 673 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 FAM149B1Q96BN6 582 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 BTBD6Q96KE9 485 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ATP6V1G3Q96LB4 118 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 ADCY3O60266 1144 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 SOX5P35711 763 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 MLH1P40692 756 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 KLC2Q9H0B6 622 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
SMAD3-201ENST00000327367 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
SMAD3-201ENST00000327367 HADHAP40939 763 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 KDSRQ06136 332 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 LRRC8EQ6NSJ5 796 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 PLA2G4DQ86XP0 818 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 MED23Q9ULK4 1368 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 BRAFP15056 766 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 ADCK1Q86TW2 530 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 AIFM3Q96NN9 605 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 VPS11Q9H270 941 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 TSR3Q9UJK0 312 aaKnown RBP17.65■□□□□ 0.42
SMAD3-201ENST00000327367 FLT4P35916 1363 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 WDR64B1ANS9 1081 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 CYP2C19P33261 490 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 PRAMEP78395 509 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 PCDHB6Q9Y5E3 794 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 TCP11X1B4DZS4 312 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 GCFC2P16383 781 aaKnown RBP17.65■□□□□ 0.42
SMAD3-201ENST00000327367 MAP4P27816 1152 aaKnown RBP17.65■□□□□ 0.42
SMAD3-201ENST00000327367 SOX11P35716 441 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 SH3GL2Q99962 352 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 HOXC9P31274 260 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 TRAF7Q6Q0C0 670 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 NAF1Q96HR8 494 aaKnown RBP17.65■□□□□ 0.42
SMAD3-201ENST00000327367 ABHD10Q9NUJ1 306 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 AURKCQ9UQB9 309 aa17.65■□□□□ 0.42
SMAD3-201ENST00000327367 RTCBQ9Y3I0 505 aaKnown RBP17.65■□□□□ 0.42
SMAD3-201ENST00000327367 PJA2O43164 708 aa17.64■□□□□ 0.41
SMAD3-201ENST00000327367 NBNO60934 754 aa17.64■□□□□ 0.41
SMAD3-201ENST00000327367 SERPINB4P48594 390 aa17.64■□□□□ 0.41
SMAD3-201ENST00000327367 KIRREL3Q8IZU9 778 aa17.64■□□□□ 0.41
SMAD3-201ENST00000327367 CFAP73A6NFT4 308 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms