RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TRIM11Q96F44 468 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TTC4O95801 387 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 GNAT1P11488 350 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 GJA8P48165 433 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 HERC4Q5GLZ8 1057 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ZSCAN29Q8IWY8 852 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PROM2Q8N271 834 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 AATKQ6ZMQ8 1374 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 E7ENQ6 273 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 IGF2BP3O00425 579 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 FTCDO95954 541 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 BYSLQ13895 437 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 NECTIN1Q15223 517 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PPP4R3CPQ6ZMV5 832 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 MYCBPAPQ8TBZ2 947 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PNKPQ96T60 521 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 METTL14Q9HCE5 456 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 GID8Q9NWU2 228 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 DLGAP2Q9P1A6 1054 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 EXOC7Q9UPT5 735 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 COL4A3BPQ9Y5P4 624 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 POGZQ7Z3K3 1410 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SCN11AQ9UI33 1791 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 POC1B-GALNT4F8VUJ3 575 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 NXNQ6DKJ4 435 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 AZI2Q9H6S1 392 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 SENP1Q9P0U3 644 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 SCN4AP35499 1836 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 GIPC1O14908 333 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 OCA2Q04671 838 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 PTPN21Q16825 1174 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF589Q86UQ0 364 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 HIC2Q96JB3 615 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 MYL10Q9BUA6 226 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 AP1M1Q9BXS5 423 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 C10orf88Q9H8K7 445 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 DNM3Q9UQ16 869 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 MPDZO75970 2070 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 MAFGO15525 162 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 DDAH1O94760 285 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 SERPINB3P29508 390 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 TOB2Q14106 344 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 PI4K2BQ8TCG2 481 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 TEKT4Q8WW24 435 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 RAB20Q9NX57 234 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 H2AFZP0C0S5 128 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 VHLP40337 213 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 DHX34Q14147 1143 aaKnown RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 H2AFVQ71UI9 128 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 PAGE5Q96GU1 130 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 RNF26Q9BY78 433 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 FAM129AQ9BZQ8 928 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 EXOC5O00471 708 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 ACTN1P12814 892 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 PMS2P54278 862 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 AP1B1Q10567 949 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 PTPROQ16827 1216 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 AKNAD1Q5T1N1 836 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 RASSF3Q86WH2 238 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 TERB1Q8NA31 727 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 A0A0G2JND7 137 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 S100BP04271 92 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-201ENST00000322213 LDHCP07864 332 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 STAT2P52630 851 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 MB21D1Q8N884 522 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 CARD9Q9H257 536 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 STK36Q9NRP7 1315 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 SCN2AQ99250 2005 aa7.59□□□□□ -1.19
SMC1A-201ENST00000322213 IQANK1A0A1B0GTG1 560 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 BLIDQ8IZY5 108 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF280CQ8ND82 737 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 STAMQ92783 540 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 XAGE2Q96GT9 111 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 CATSPER2Q96P56 530 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF446Q9NWS9 450 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 ANKFY1Q9P2R3 1169 aa7.59□□□□□ -1.2
SMC1A-201ENST00000322213 AGTP01019 485 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 HDAC4P56524 1084 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC124Q96CT7 223 aaKnown RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ZBTB3Q9H5J0 574 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 MAD1L1Q9Y6D9 718 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 A0A1W2PQC6 194 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 GGPS1O95749 300 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 OR52Z1P0C646 297 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 AARSP49588 968 aaKnown RBP eCLIP7.58□□□□□ -1.22e-6■■□□□ 12.4
SMC1A-201ENST00000322213 PSMC1P62191 440 aaKnown RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ART3Q13508 389 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 KCNB1Q14721 858 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 NR1I3Q14994 352 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 ARL6IP4Q66PJ3 421 aaKnown RBP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 RINLQ6ZS11 566 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMC1A-201ENST00000322213 A2ML1A8K2U0 1454 aa7.58□□□□□ -1.2
SMC1A-201ENST00000322213 DCAF8L1A6NGE4 600 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms