RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
RPP40-201ENST00000319533 GHRP10912 638 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 BMPR1AP36894 532 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 TTC3P53804 2025 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 MTMR1Q13613 665 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 GRIK4Q16099 956 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 RSPH3Q86UC2 560 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 TEX2Q8IWB9 1127 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
RPP40-201ENST00000319533 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 RWDD3Q9Y3V2 267 aa16.32■□□□□ 0.2
RPP40-201ENST00000319533 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 ADGRA3Q8IWK6 1321 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 RRN3P2A6NIE6 340 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 H3BQ06 376 aaPredicted RBP16.31■□□□□ 0.2
RPP40-201ENST00000319533 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
RPP40-201ENST00000319533 CRIPAKQ8N1N5 446 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 PCYT2Q99447 389 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 PRKAG3Q9UGI9 489 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 PCDHA6Q9UN73 950 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 PCDHA8Q9Y5H6 950 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 SQORQ9Y6N5 450 aa16.31■□□□□ 0.2
RPP40-201ENST00000319533 FAM86C2PA6NEL3 165 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 PRR33A8MZF0 331 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 SLC27A2O14975 620 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 DGKIO75912 1065 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 CTNNB1P35222 781 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 LTBRP36941 435 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 UBE2SQ16763 222 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 NFXL1Q6ZNB6 911 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 SGMS1Q86VZ5 419 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 GLG1Q92896 1179 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
RPP40-201ENST00000319533 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
RPP40-201ENST00000319533 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 GRM6O15303 877 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 ALADP13716 330 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 INSRRP14616 1297 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 RXRAP19793 462 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 MARK3P27448 753 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
RPP40-201ENST00000319533 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 LINC01599Q8WXQ3 324 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 MXRA8Q9BRK3 442 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
RPP40-201ENST00000319533 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
RPP40-201ENST00000319533 FAM50BQ9Y247 325 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
RPP40-201ENST00000319533 NFASCO94856 1347 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 ZP2Q05996 745 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 IER5Q5VY09 327 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 CREB3L3Q68CJ9 461 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 FAM43BQ6ZT52 329 aaPredicted RBP16.28■□□□□ 0.2
RPP40-201ENST00000319533 PLPPR4Q7Z2D5 763 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 RTN4RL1Q86UN2 441 aaPredicted RBP16.28■□□□□ 0.2
RPP40-201ENST00000319533 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
RPP40-201ENST00000319533 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 FTHL17Q9BXU8 183 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 PCDHA2Q9Y5H9 948 aa16.28■□□□□ 0.2
RPP40-201ENST00000319533 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 ATG7O95352 703 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 MMP1P03956 469 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
RPP40-201ENST00000319533 HYAL1Q12794 435 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
RPP40-201ENST00000319533 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 P2RX5Q93086 422 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.2
RPP40-201ENST00000319533 PIEZO1Q92508 2521 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 KDM3AQ9Y4C1 1321 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 MUC6Q6W4X9 2439 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 CD52P31358 61 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 ACTR2P61160 394 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 FUT2Q10981 343 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 CAMK1Q14012 370 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 PLCB4Q15147 1175 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 PPP1R18Q6NYC8 613 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 NPAS4Q8IUM7 802 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 ADHFE1Q8IWW8 467 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms