RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NAA35Q5VZE5 725 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 MICALL1Q8N3F8 863 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 NSUN4Q96CB9 384 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 RIC8AQ9NPQ8 531 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 SAMD15Q9P1V8 674 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 EPHX2P34913 555 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 CDO1Q16878 200 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 MAPK4P31152 587 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 IPO11Q9UI26 975 aaKnown RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 GSG1L2A8MUP6 293 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 GFPT2O94808 682 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 H2AFZP0C0S5 128 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 H2AFVQ71UI9 128 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 MCPH1Q8NEM0 835 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 CARD6Q9BX69 1037 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 GCOM2Q9BZD3 368 aaPredicted RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 SGK1O00141 431 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 CD163L1Q9NR16 1453 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 KRT76Q01546 638 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 RNF219Q5W0B1 726 aaPredicted RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 RWDD4Q6NW29 188 aaKnown RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 AFG1LQ8WV93 481 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 FLT1P17948 1338 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 NEXMIFQ5QGS0 1516 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 CETPP11597 493 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 DYNLT1P63172 113 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 TSPY1Q01534 308 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
RFFL-201ENST00000315249 PRPF31Q8WWY3 499 aaKnown RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
RFFL-201ENST00000315249 KIDINS220Q9ULH0 1771 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 ZNF658Q5TYW1 1059 aaPredicted RBP14.63□□□□□ -0.07
RFFL-201ENST00000315249 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 TMEM63CQ9P1W3 806 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 MOSPD1Q9UJG1 213 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 PREX1Q8TCU6 1659 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 LRRC7Q96NW7 1537 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 SLC16A4O15374 487 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 CIITAP33076 1130 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 SF3A3Q12874 501 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■■■■ 39.1
RFFL-201ENST00000315249 TRIM28Q13263 835 aaKnown RBP14.63□□□□□ -0.07
RFFL-201ENST00000315249 PADI6Q6TGC4 694 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 ANKRD13AQ8IZ07 590 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 CALN1Q9BXU9 219 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 PTPN22Q9Y2R2 807 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 HHATQ5VTY9 493 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 POLR3EQ9NVU0 708 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 HUS1O60921 280 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 EPHB1P54762 984 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 SETDB1Q15047 1291 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 RAB17Q9H0T7 212 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 CNTNAP4Q9C0A0 1308 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 C19orf81C9J6K1 198 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 RARBP10826 455 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 DENND2CQ68D51 928 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 DNAJC24Q6P3W2 148 aa14.63□□□□□ -0.07
RFFL-201ENST00000315249 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
RFFL-201ENST00000315249 QARSP47897 775 aaKnown RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 NECTIN1Q15223 517 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 NCAPGQ9BPX3 1015 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 SRPRBQ9Y5M8 271 aaKnown RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 KIF28PB7ZC32 967 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 KCTD6Q8NC69 237 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 BEST2Q8NFU1 509 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 MED14O60244 1454 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 PTPN21Q16825 1174 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 ZNF667Q5HYK9 610 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TMED8Q6PL24 325 aaPredicted RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 STAG2Q8N3U4 1231 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TEX13BQ9BXU2 312 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 SETBP1Q9Y6X0 1596 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 HEXIM1O94992 359 aaKnown RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 ARL4AP40617 200 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TMEM62Q0P6H9 643 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 KRT33BQ14525 404 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 RPS6KA2Q15349 733 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 HDXQ7Z353 690 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 GDAP1Q8TB36 358 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 FAM213AQ9BRX8 229 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 KDM4FA0A1W2PPD8 638 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 FDX1P10109 184 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
RFFL-201ENST00000315249 ZNF449Q6P9G9 518 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 DCLK2Q8N568 766 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 TRIM58Q8NG06 486 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 ABCF3Q9NUQ8 709 aa14.62□□□□□ -0.07
RFFL-201ENST00000315249 GSTA1P08263 222 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 GSTA2P09210 222 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms