RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 CENPPQ6IPU0 288 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 POTEBQ6S5H4 581 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 USP17L1Q7RTZ2 530 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 CMTR1Q8N1G2 835 aaKnown RBP6.78□□□□□ -1.32
EXD1-201ENST00000314992 MMS19Q96T76 1030 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 GAS2L1Q99501 681 aaPredicted RBP6.78□□□□□ -1.32
EXD1-201ENST00000314992 SNX12Q9UMY4 172 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 ATAD5Q96QE3 1844 aa6.78□□□□□ -1.32
EXD1-201ENST00000314992 SSU72P8A0A1W2PR75 194 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ESYT2A0FGR8 921 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GOLGA8KD6RF30 607 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 hCG_1984214I3L0E3 225 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 AGPSO00116 658 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CES2O00748 559 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ZEB2O60315 1214 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 N4BP1O75113 896 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 RNF40O75150 1001 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PRDM1O75626 825 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 FGFR1OPO95684 399 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 ATP1A1P05023 1023 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 RHOXF2BP0C7M4 288 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 TCP1P17987 556 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 CASP1P29466 404 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 DSG3P32926 999 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GPSM2P81274 684 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 AMPD3Q01432 767 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PPIL2Q13356 520 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 MIIPQ5JXC2 388 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CCDC122Q5T0U0 273 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CCDC70Q6NSX1 233 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 EMBQ6PCB8 327 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PIK3AP1Q6ZUJ8 805 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 MREGQ8N565 214 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ZNF713Q8N859 430 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 HERVK_113Q902F9 699 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.33
EXD1-201ENST00000314992 FAM84BQ96KN1 310 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 LBHD1Q9BQE6 289 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 RHOXF2Q9BQY4 288 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 TUBGCP2Q9BSJ2 902 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 SPZ1Q9BXG8 430 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 NUCKS1Q9H1E3 243 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 YY1AP1Q9H869 796 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 NHEJ1Q9H9Q4 299 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 DCP1AQ9NPI6 582 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 GGA2Q9UJY4 613 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 BAZ2AQ9UIF9 1905 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 CDC25AP30304 524 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PPP4CP60510 307 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PPFIA1Q13136 1202 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 SEPT2Q15019 361 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CAVIN4Q5BKX8 364 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 NCAPH2Q6IBW4 605 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 CCDC84Q86UT8 332 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 SPATS2Q86XZ4 545 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 CD302Q8IX05 232 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 EFCAB13Q8IY85 973 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 MIGA1Q8NAN2 632 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.77□□□□□ -1.33
EXD1-201ENST00000314992 SDR42E1Q8WUS8 393 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 NECAB3Q96P71 396 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 ZMYND12Q9H0C1 365 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 BLZF1Q9H2G9 400 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 BARHL2Q9NY43 387 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PCDHA6Q9UN73 950 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 KCNH4Q9UQ05 1017 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 SIK3Q9Y2K2 1263 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GDAQ9Y2T3 454 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 PCDHA8Q9Y5H6 950 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 USP17L21D6R901 530 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 USO1O60763 962 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 TACC1O75410 805 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 ATP2B1P20020 1258 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 FKBP1AP62942 108 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 PSMD2Q13200 908 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ACAP1Q15027 740 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ASTE1Q2TB18 679 aaPredicted RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 PRAMEF18Q5VWM3 479 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 KRT25Q7Z3Z0 450 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 CCDC82Q8N4S0 544 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 TRIM9Q9C026 710 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 DEFB129Q9H1M3 183 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 SH2D4AQ9H788 454 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ZSWIM4Q9H7M6 989 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 FAM204AQ9H8W3 233 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 ALG13Q9NP73 1137 aaKnown RBP6.77□□□□□ -1.33
EXD1-201ENST00000314992 STK17AQ9UEE5 414 aa6.77□□□□□ -1.33
EXD1-201ENST00000314992 GUCA1BQ9UMX6 200 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms