RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SRRTQ9BXP5 876 aaKnown RBP13.34□□□□□ -0.27
TPM3-202ENST00000302206 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 HOMER2Q9NSB8 354 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 KCND2Q9NZV8 630 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
TPM3-202ENST00000302206 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 LOXHD1Q8IVV2 1947 aa13.34□□□□□ -0.27
TPM3-202ENST00000302206 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 DHX15O43143 795 aaKnown RBP13.33□□□□□ -0.28
TPM3-202ENST00000302206 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
TPM3-202ENST00000302206 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
TPM3-202ENST00000302206 SKILP12757 684 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 GAP43P17677 238 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 MTMR1Q13613 665 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 TRIM14Q14142 442 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 GIT2Q14161 759 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 ARID5BQ14865 1188 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 HSP90AA4PQ58FG1 418 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
TPM3-202ENST00000302206 ARMC9Q7Z3E5 817 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 RIOX2Q8IUF8 465 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 NSUN6Q8TEA1 469 aaKnown RBP13.33□□□□□ -0.28
TPM3-202ENST00000302206 GPRASP2Q96D09 838 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 UIMC1Q96RL1 719 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 TSG101Q99816 390 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 TMX1Q9H3N1 280 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
TPM3-202ENST00000302206 A0A1W2PQC6 194 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 N4BP3O15049 544 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 LYPLA2O95372 231 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 TPM2P07951 284 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
TPM3-202ENST00000302206 COPB2P35606 906 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 PSMC6P62333 389 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.282e-40■□□□□ 9.6
TPM3-202ENST00000302206 RGMBQ6NW40 437 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
TPM3-202ENST00000302206 NLRX1Q86UT6 975 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
TPM3-202ENST00000302206 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 TEX33O43247 280 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 TRPA1O75762 1119 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 P4HBP07237 508 aaKnown RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 NR3C2P08235 984 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 SFNP31947 248 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 JAK3P52333 1124 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 KRT76Q01546 638 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 LDLRAD1Q5T700 205 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 INPP4AQ96PE3 977 aaPredicted RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 SENP7Q9BQF6 1050 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 BHMT2Q9H2M3 363 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
TPM3-202ENST00000302206 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.281e-10■■■□□ 15.1
TPM3-202ENST00000302206 COL4A3BPQ9Y5P4 624 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 PFASO15067 1338 aa13.31□□□□□ -0.28
TPM3-202ENST00000302206 CHMP2AO43633 222 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 COBLO75128 1261 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 MYCLP12524 364 aaPredicted RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 DNM2P50570 870 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 PPFIBP1Q86W92 1011 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
TPM3-202ENST00000302206 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 ZNF507Q8TCN5 953 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 HPS3Q969F9 1004 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 CNOT6LQ96LI5 555 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms