RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 FOXO6A8MYZ6 492 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
SNX20-201ENST00000300590 KRT16P08779 473 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 OR52Z1P0C646 297 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 PTK2Q05397 1052 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 ZNF211Q13398 564 aaPredicted RBP11.97□□□□□ -0.49
SNX20-201ENST00000300590 TAF11Q15544 211 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 ANKRD42Q8N9B4 389 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 SCFD2Q8WU76 684 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 ZNF317Q96PQ6 595 aaPredicted RBP11.97□□□□□ -0.49
SNX20-201ENST00000300590 TSG101Q99816 390 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 ASAP1Q9ULH1 1129 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 SH3BP1Q9Y3L3 701 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 MYH7BA7E2Y1 1941 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 DDAH1O94760 285 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 SLC29A2Q14542 456 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 MIS18BP1Q6P0N0 1132 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.49
SNX20-201ENST00000300590 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNX20-201ENST00000300590 ZCWPW1Q9H0M4 648 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 FGFR1OP2Q9NVK5 253 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNX20-201ENST00000300590 MYH7P12883 1935 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 MYL1P05976 194 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 KRT13P13646 458 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 USP11P51784 963 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 DENND2CQ68D51 928 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.49
SNX20-201ENST00000300590 P3H4Q92791 437 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 GJA10Q969M2 543 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 CNOT10Q9H9A5 744 aaKnown RBP11.96□□□□□ -0.49
SNX20-201ENST00000300590 CEP72Q9P209 647 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 STX8Q9UNK0 236 aa11.96□□□□□ -0.49
SNX20-201ENST00000300590 POTEMA6NI47 508 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 PDE8AO60658 829 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 MYBP10242 640 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 FGFR2P21802 821 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 KIF5BP33176 963 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.5
SNX20-201ENST00000300590 DISP2A7MBM2 1401 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 PAEPP09466 180 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 ABCB4P21439 1286 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 NAPAP54920 295 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 NCALDP61601 193 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 RNASELQ05823 741 aaKnown RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 HOOK3Q86VS8 718 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 GDAP1Q8TB36 358 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 EPS8L3Q8TE67 593 aaKnown RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 OSBPL1AQ9BXW6 950 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 ZMYND12Q9H0C1 365 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 KCNK9Q9NPC2 374 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 SLC12A4Q9UP95 1085 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 COL4A3BPQ9Y5P4 624 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 DDX60Q8IY21 1712 aaKnown RBP11.95□□□□□ -0.5
SNX20-201ENST00000300590 FLT1P17948 1338 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 SMNDC1O75940 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNX20-201ENST00000300590 C11orf91Q3C1V1 193 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 PNMA1Q8ND90 353 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 DDX12PQ92771 950 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 PBKQ96KB5 322 aa11.95□□□□□ -0.5
SNX20-201ENST00000300590 TCP11X1B4DZS4 312 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 H0Y3Z8 333 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 SMIM24O75264 130 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 SLC9A1P19634 815 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 FGFR4P22455 802 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 PCK1P35558 622 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 TFAP4Q01664 338 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 TCERG1LQ5VWI1 586 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 ZNF571Q7Z3V5 609 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 SLIT3O75094 1523 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 RARAP10276 462 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 RBM5P52756 815 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX20-201ENST00000300590 PMS2P54278 862 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 SPTY2D1Q68D10 685 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 FBXO25Q8TCJ0 367 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 LARP4BQ92615 738 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 ACSBG1Q96GR2 724 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 FGFBP2Q9BYJ0 223 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 SEPT11Q9NVA2 429 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 ETAA1Q9NY74 926 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 LAMB4A4D0S4 1761 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms