RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 NFASCO94856 1347 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 SPATA31C2B4DYI2 1134 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 PDHXO00330 501 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 TBCAO75347 108 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 ERVK-9P63128 1117 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 ERVK-24P63145 666 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 RAD51AP2Q09MP3 1159 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 KCTD2Q14681 263 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 CENPPQ6IPU0 288 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 TMC6Q7Z403 805 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 ANKRD23Q86SG2 305 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 SMAP1Q8IYB5 467 aaPredicted RBP17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 CSGALNACT2Q8N6G5 542 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 SHCBP1Q8NEM2 672 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 SENP7Q9BQF6 1050 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 ZHX3Q9H4I2 956 aa17.45■□□□□ 0.38
HERPUD1-201ENST00000300302 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 KCNJ18B7U540 433 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 RGS20O76081 388 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 KCNA2P16389 499 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 CCNA1P78396 465 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 LRRC63Q05C16 580 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 KCNJ12Q14500 433 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 Q3C1V9 767 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 TCP11X2Q5H9J9 407 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 ANKRD40Q6AI12 368 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 FAM114A1Q8IWE2 563 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 MMP19Q99542 508 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 MAGEC2Q9UBF1 373 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 LIMA1Q9UHB6 759 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 LYPLA2O95372 231 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 FGFR1OPO95684 399 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 CYP2C8P10632 490 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 GAP43P17677 238 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 ICAM3P32942 547 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 FOXR2Q6PJQ5 311 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 VSTM4Q8IW00 320 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 GPRC5AQ8NFJ5 357 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 ZNF830Q96NB3 372 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 TSG101Q99816 390 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 RUSC1Q9BVN2 902 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 SRRTQ9BXP5 876 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
HERPUD1-201ENST00000300302 LRRC10BA6NIK2 292 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 HUNKP57058 714 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 PSMC5P62195 406 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 NR1I3Q14994 352 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 APTXQ7Z2E3 356 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 BRI3BPQ8WY22 251 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 DUSP9Q99956 384 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 SEMA6BQ9H3T3 888 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 JPH1Q9HDC5 661 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 PCDHA2Q9Y5H9 948 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 ASTN1O14525 1302 aa17.43■□□□□ 0.38
HERPUD1-201ENST00000300302 SOWAHBA6NEL2 793 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 DKC1O60832 514 aaKnown RBP eCLIP17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 CCNE2O96020 404 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 EDNRBP24530 442 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 WDR78Q5VTH9 848 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 CREBRFQ8IUR6 639 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 TBC1D7Q9P0N9 293 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 SLC9A2Q9UBY0 812 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 ODF2LQ9ULJ1 636 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
HERPUD1-201ENST00000300302 ZBTB39O15060 712 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 FAM13AO94988 1023 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 KRT31Q15323 416 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 LRRC41Q15345 812 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 CCDC150Q8NCX0 1101 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 INTS13Q9NVM9 706 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 PSAPP07602 524 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 TPM2P07951 284 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 GUCY2CP25092 1073 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 SPECC1LQ69YQ0 1117 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 SFR1Q86XK3 245 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 ATP6V0A1Q93050 837 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 KCNF1Q9H3M0 494 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
HERPUD1-201ENST00000300302 DNAJC25-GNG10A0A024R161 153 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms