RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 DENND2CQ68D51 928 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 NSRP1Q9H0G5 558 aaKnown RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 ZCWPW1Q9H0M4 648 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 TMBIM4Q9HC24 238 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 EME2A4GXA9 379 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 RASSF9O75901 435 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 ATP2B4P23634 1241 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 ERVK-9P63128 1117 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF211Q13398 564 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 SRBD1Q8N5C6 995 aaKnown RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 LONP1P36776 959 aaKnown RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 CCDC6Q16204 474 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 PROM2Q8N271 834 aa16.2■□□□□ 0.18
SPIDR-201ENST00000297423 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPIDR-201ENST00000297423 ELF3P78545 371 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 IL17AQ16552 155 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 LRRC34Q8IZ02 419 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 CAVIN3Q969G5 261 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 G3BP2Q9UN86 482 aaKnown RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 ADAMTS3O15072 1205 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 ITGA4P13612 1032 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 TTI2Q6NXR4 508 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 VSIG1Q86XK7 387 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 ELOA2Q8IYF1 753 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 GPR101Q96P66 508 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 CCT8L1PA6NM43 557 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 CALML3P27482 149 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 PKN1Q16512 942 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 CAND2O75155 1236 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 TM4SF1P30408 202 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 VPS41P49754 854 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 ZFYVE27Q5T4F4 411 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 DUSP9Q99956 384 aaKnown RBP16.19■□□□□ 0.18
SPIDR-201ENST00000297423 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 TBK1Q9UHD2 729 aa16.19■□□□□ 0.18
SPIDR-201ENST00000297423 GSTTP1A0A1W2PQM5 241 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 LDHCP07864 332 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF844Q08AG5 666 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF507Q8TCN5 953 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 AGAP11Q8TF27 550 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 CTNNBL1Q8WYA6 563 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 ECT2Q9H8V3 914 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 BIN2Q9UBW5 565 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 A8MUI8 341 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 KCNJ2P63252 427 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 XPO6Q96QU8 1125 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 HIP1RO75146 1068 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 IRX1P78414 480 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 GSTO1P78417 241 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 FMO2Q99518 471 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 ZC3H12CQ9C0D7 883 aaKnown RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-201ENST00000297423 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 IGF2BP3O00425 579 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPIDR-201ENST00000297423 FGGP02679 453 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 ALDH1B1P30837 517 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 GPSM2P81274 684 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 MTMR3Q13615 1198 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 HOOK3Q86VS8 718 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 A0A087X0T9 212 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 PGRMC1O00264 195 aaKnown RBP16.17■□□□□ 0.18
SPIDR-201ENST00000297423 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
SPIDR-201ENST00000297423 TRAPPC3O43617 180 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 BAG3O95817 575 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 FAM228BP0C875 321 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms