RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DCP1AQ9NPI6 582 aaPredicted RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 STXBP3O00186 592 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 RGS16O15492 202 aaPredicted RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PPIP5K2O43314 1243 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PRPHP41219 470 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PLTPP55058 493 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 GRB10Q13322 594 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 CALCRLQ16602 461 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TMEM266Q2M3C6 531 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 MAGEC3Q8TD91 643 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 P3H4Q92791 437 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 KCPQ6ZWJ8 1503 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 GLI3P10071 1580 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 CLSTN1O94985 981 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 FGGP02679 453 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 MYBP10242 640 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 GHRP10912 638 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 MAP2K1Q02750 393 aaPredicted RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 CCDC38Q502W7 563 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 AGAP11Q8TF27 550 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 EDEM3Q9BZQ6 932 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 ABCF3Q9NUQ8 709 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 CYTH3O43739 400 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KRT13P13646 458 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 GNAQP50148 359 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KCNJ2P63252 427 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 ERMARDQ5T6L9 678 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 DENND2CQ68D51 928 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 ALKBH5Q6P6C2 394 aaKnown RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 BARHL2Q9NY43 387 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 C15orf41Q9Y2V0 281 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KRT18P05783 430 aaKnown RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 LRRC14Q15048 493 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 ZKSCAN8Q15776 578 aaPredicted RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KRT79Q5XKE5 535 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 TRPM8Q7Z2W7 1104 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 LMBR1Q8WVP7 490 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 GJA10Q969M2 543 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 NOP53Q9NZM5 478 aaKnown RBP11.19□□□□□ -0.62
LMX1A-201ENST00000294816 TMEM59LQ9UK28 342 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 SNX24Q9Y343 169 aa11.19□□□□□ -0.62
LMX1A-201ENST00000294816 KLRF2D3W0D1 207 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 PCP11498 1178 aaKnown RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 FAM26FQ5R3K3 315 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF571Q7Z3V5 609 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 YIPF3Q9GZM5 350 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 FAM114A2Q9NRY5 505 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 SEPT11Q9NVA2 429 aaKnown RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 TRPC6Q9Y210 931 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 PVALEFA0A1B0GWK0 134 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 CCDC188H7C350 402 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 UBOX5O94941 541 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF211Q13398 564 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 KCNK18Q7Z418 384 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 CCDC25Q86WR0 208 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 SLC44A5Q8NCS7 719 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 ARMC2Q8NEN0 867 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 PNMA5Q96PV4 448 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 MTFR1LQ9H019 292 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 NSRP1Q9H0G5 558 aaKnown RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
LMX1A-201ENST00000294816 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
LMX1A-201ENST00000294816 A8MUI8 341 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 RTN2O75298 545 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 PAEPP09466 180 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SLC9A1P19634 815 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ABCB4P21439 1286 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 IRX1P78414 480 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms