RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 SRGNP10124 158 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 PLCG2P16885 1265 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 SHMT1P34896 483 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 CCNHP51946 323 aaPredicted RBP13.2□□□□□ -0.3
CLPB-201ENST00000294053 PDE4DQ08499 809 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 MAEAQ7L5Y9 396 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 KCNK18Q7Z418 384 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 FAM107AO95990 144 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 DNM2P50570 870 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 KIF11P52732 1056 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 STAMBPL1Q96FJ0 436 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 DUSP9Q99956 384 aaKnown RBP13.2□□□□□ -0.3
CLPB-201ENST00000294053 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 LRRC10BA6NIK2 292 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 SELENOSQ9BQE4 189 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 AP1M1Q9BXS5 423 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 LTBP1Q14766 1721 aa13.2□□□□□ -0.3
CLPB-201ENST00000294053 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 TCP1P17987 556 aaKnown RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 GNA11P29992 359 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 SKOR1P84550 965 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 ECM1Q16610 540 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 KIAA0895Q8NCT3 520 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 DNAJC7Q99615 494 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 FAM167BQ9BTA0 163 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 RHOBTB3O94955 611 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 SPATS2Q86XZ4 545 aaKnown RBP13.19□□□□□ -0.3
CLPB-201ENST00000294053 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 NSMCE1Q8WV22 266 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 KANSL2Q9H9L4 492 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 STK38LQ9Y2H1 464 aa13.19□□□□□ -0.3
CLPB-201ENST00000294053 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 MMP10P09238 476 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 ZBED6P86452 979 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 GRB10Q13322 594 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 KDM7AQ6ZMT4 941 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 SEC16BQ96JE7 1060 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 SALL4Q9UJQ4 1053 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 RASSF9O75901 435 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
CLPB-201ENST00000294053 IFNAR2P48551 515 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 CALCRLQ16602 461 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 ADAT2Q7Z6V5 191 aaKnown RBP13.18□□□□□ -0.3
CLPB-201ENST00000294053 KSR1Q8IVT5 923 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 CASKIN2Q8WXE0 1202 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 YIPF3Q9GZM5 350 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 DDTLA6NHG4 134 aaPredicted RBP13.18□□□□□ -0.3
CLPB-201ENST00000294053 MYMKA6NI61 221 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 SCTRP47872 440 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 NOVP48745 357 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 LRRC41Q15345 812 aa13.18□□□□□ -0.3
CLPB-201ENST00000294053 GKAP1Q5VSY0 366 aaPredicted RBP13.18□□□□□ -0.3
CLPB-201ENST00000294053 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms