RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TPH2Q8IWU9 490 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 ERMNQ8TAM6 284 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 TCEAL9Q9UHQ7 104 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 A6NJR5 290 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 NOP56O00567 594 aaKnown RBP24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 ZBTB39O15060 712 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 PSMC6P62333 389 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 FAM160A1Q05DH4 1040 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 SLC9C1Q4G0N8 1177 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 HAUS3Q68CZ6 603 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 MIS18BP1Q6P0N0 1132 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 POTEGQ6S5H5 508 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 LXNQ9BS40 222 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 GABBR1Q9UBS5 961 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 KIAA1024Q9UPX6 916 aa24.45■■□□□ 1.5
PDLIM3-203ENST00000284771 ZNF202O95125 648 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 PSAPP07602 524 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 PLCG1P19174 1290 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 SYKP43405 635 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 LONRF3Q496Y0 759 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 TMEM119Q4V9L6 283 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 FBXO46Q6PJ61 603 aaPredicted RBP24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 TUFT1Q9NNX1 390 aa24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 HMX1Q9NP08 348 aaPredicted RBP24.44■■□□□ 1.5
PDLIM3-203ENST00000284771 MYADML2A6NDP7 307 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 ZNF862O60290 1169 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 PGK1P00558 417 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 MMP3P08254 477 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 HOXD8P13378 290 aaPredicted RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 ATP4AP20648 1035 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 TXLNAP40222 546 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 QARSP47897 775 aaKnown RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 MTFR1Q15390 333 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 LHX8Q68G74 356 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 TRIM50Q86XT4 487 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 BLOC1S4Q9NUP1 217 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 DDX19AQ9NUU7 478 aaKnown RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 DACT1Q9NYF0 836 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 DDX20Q9UHI6 824 aaKnown RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 MAFBQ9Y5Q3 323 aaPredicted RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 MYH9P35579 1960 aaKnown RBP24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 SYNRGQ9UMZ2 1314 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 PPFIA4O75335 1185 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 LGR5O75473 907 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 RARBP10826 455 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 GJA9P57773 515 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 BEX3Q00994 111 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 CCDC73Q6ZRK6 1079 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 DHX58Q96C10 678 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 CALML4Q96GE6 196 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 UNC93B1Q9H1C4 597 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 CCDC39Q9UFE4 941 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 STK24Q9Y6E0 443 aa24.43■■□□□ 1.5
PDLIM3-203ENST00000284771 E9PMD0 336 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 ADAMTS4O75173 837 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 STBD1O95210 358 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 MYCP01106 439 aaPredicted RBP24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 PSMC5P62195 406 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 RRAGBQ5VZM2 374 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 NEK9Q8TD19 979 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 ZNF302Q9NR11 478 aa24.42■■□□□ 1.5
PDLIM3-203ENST00000284771 IGSF9BQ9UPX0 1349 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 BACH1O14867 736 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 ACTN4O43707 911 aaKnown RBP24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 STAT5BP51692 787 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 PKN2Q16513 984 aaKnown RBP24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 UTP14CQ5TAP6 766 aaKnown RBP24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 TRMT1LQ7Z2T5 733 aaKnown RBP24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 RASSF8Q8NHQ8 419 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 AFAP1L1Q8TED9 768 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 PIGOQ8TEQ8 1089 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 C16orf70Q9BSU1 422 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 NT5C3AQ9H0P0 336 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 AP5M1Q9H0R1 490 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 UPF3AQ9H1J1 476 aaKnown RBP24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 ZSWIM4Q9H7M6 989 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 SERTAD1Q9UHV2 236 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 KDM3AQ9Y4C1 1321 aa24.41■■□□□ 1.5
PDLIM3-203ENST00000284771 LGALS2P05162 132 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 NKX3-2P78367 333 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 PDXDC2PQ6P474 469 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 C4orf19Q8IY42 314 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 CDK5RAP3Q96JB5 506 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 MTRQ99707 1265 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 XPNPEP3Q9NQH7 507 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 PRDM10Q9NQV6 1147 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 EMSYQ7Z589 1322 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 TMEM150BA6NC51 233 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 SLC26A4O43511 780 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 LYPLA2O95372 231 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 C6orf222P0C671 652 aaPredicted RBP24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 MUTP22033 750 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 FSCN1Q16658 493 aaKnown RBP24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 IQUBQ8NA54 791 aa24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.4■■□□□ 1.5
PDLIM3-203ENST00000284771 MBD3O95983 291 aa24.39■■□□□ 1.49
PDLIM3-203ENST00000284771 ZNF286BP0CG31 522 aa24.39■■□□□ 1.49
PDLIM3-203ENST00000284771 STAT6P42226 847 aa24.39■■□□□ 1.49
PDLIM3-203ENST00000284771 DGKDQ16760 1214 aa24.39■■□□□ 1.49
PDLIM3-203ENST00000284771 KRBA2Q6ZNG9 492 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms