RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 TYW1Q9NV66 732 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 HDAC9Q9UKV0 1011 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 PSME4Q14997 1843 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NKRFO15226 690 aaKnown RBP eCLIP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 ZNF185O15231 689 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 EIF3DO15371 548 aaKnown RBP eCLIP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 ECE2O60344 883 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NOL4O94818 638 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NDUFB10O96000 172 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 EPB41P11171 864 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NAP1L1P55209 391 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NNTQ13423 1086 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 GIT2Q14161 759 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NAB2Q15742 525 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 STXBP4Q6ZWJ1 553 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 KIAA0825Q8IV33 1275 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 SELENOOQ9BVL4 669 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 GANQ9H2C0 597 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 SUGCTQ9HAC7 445 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 FAN1Q9Y2M0 1017 aa12.54□□□□□ -0.4
SIRPB1-202ENST00000279477 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 EYA4O95677 639 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 ACTN2P35609 894 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 RASSF7Q02833 373 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 TCP10Q12799 353 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 NFIL3Q16649 462 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 C8orf74Q6P047 294 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 AENQ8WTP8 325 aaKnown RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 TUFT1Q9NNX1 390 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 TBC1D7Q9P0N9 293 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 MYH10P35580 1976 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 ZNF76P36508 570 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 SFR1Q86XK3 245 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 LENG9Q96B70 501 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 SPAG5Q96R06 1193 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 STIM2Q9P246 746 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 SCN9AQ15858 1988 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
SIRPB1-202ENST00000279477 PLSCR1O15162 318 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 RNF40O75150 1001 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 MMP10P09238 476 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 ZFPM1Q8IX07 1006 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 H0YIN7 160 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 OPA1O60313 960 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 TLR2O60603 784 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 GFPT2O94808 682 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 SPATA31C1P0DKV0 1188 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 STAT3P40763 770 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 APBA1Q02410 837 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 EXOC3L4Q17RC7 722 aa12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
SIRPB1-202ENST00000279477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms